RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 PRICKLE4Q2TBC4 344 aa10.77□□□□□ -0.69
TTC28-203ENST00000442232 FAM111BQ6SJ93 734 aa10.77□□□□□ -0.69
TTC28-203ENST00000442232 SCIMPQ6UWF3 145 aa10.77□□□□□ -0.69
TTC28-203ENST00000442232 GPRIN3Q6ZVF9 776 aa10.77□□□□□ -0.69
TTC28-203ENST00000442232 RPS27LQ71UM5 84 aaKnown RBP10.77□□□□□ -0.69
TTC28-203ENST00000442232 LCA5Q86VQ0 697 aa10.77□□□□□ -0.69
TTC28-203ENST00000442232 KIF18BQ86Y91 864 aa10.77□□□□□ -0.69
TTC28-203ENST00000442232 CNPY4Q8N129 248 aa10.77□□□□□ -0.69
TTC28-203ENST00000442232 CDYL2Q8N8U2 506 aa10.77□□□□□ -0.69
TTC28-203ENST00000442232 TNIP2Q8NFZ5 429 aa10.77□□□□□ -0.69
TTC28-203ENST00000442232 OR52R1Q8NGF1 315 aa10.77□□□□□ -0.69
TTC28-203ENST00000442232 RNASE6Q93091 150 aaKnown RBP10.77□□□□□ -0.69
TTC28-203ENST00000442232 ABTB1Q969K4 478 aaPredicted RBP10.77□□□□□ -0.69
TTC28-203ENST00000442232 TMCO6Q96DC7 493 aa10.77□□□□□ -0.69
TTC28-203ENST00000442232 RMND5BQ96G75 393 aaPredicted RBP10.77□□□□□ -0.69
TTC28-203ENST00000442232 GNRHR2Q96P88 292 aa10.77□□□□□ -0.69
TTC28-203ENST00000442232 TRIB1Q96RU8 372 aa10.77□□□□□ -0.69
TTC28-203ENST00000442232 TIMP4Q99727 224 aa10.77□□□□□ -0.69
TTC28-203ENST00000442232 C1QTNF3Q9BXJ4 246 aa10.77□□□□□ -0.69
TTC28-203ENST00000442232 PRDM14Q9GZV8 571 aa10.77□□□□□ -0.69
TTC28-203ENST00000442232 MAT2BQ9NZL9 334 aa10.77□□□□□ -0.69
TTC28-203ENST00000442232 ZNF629Q9UEG4 869 aaPredicted RBP10.77□□□□□ -0.69
TTC28-203ENST00000442232 DMGDHQ9UI17 866 aaKnown RBP10.77□□□□□ -0.69
TTC28-203ENST00000442232 MCM8Q9UJA3 840 aa10.77□□□□□ -0.69
TTC28-203ENST00000442232 MAPRE3Q9UPY8 281 aa10.77□□□□□ -0.69
TTC28-203ENST00000442232 SLC6A5Q9Y345 797 aa10.77□□□□□ -0.69
TTC28-203ENST00000442232 HIVEP1P15822 2718 aa10.77□□□□□ -0.69
TTC28-203ENST00000442232 SPG11Q96JI7 2443 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 PRAMEF25A6NGN4 478 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 EEF1E1-BLOC1S5C9J1V9 151 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 SYT5O00445 386 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 MANBAO00462 879 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 SNPHO15079 494 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 EEF1E1O43324 174 aaKnown RBP10.76□□□□□ -0.69
TTC28-203ENST00000442232 PCDH7O60245 1069 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 ABCB7O75027 752 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 ULK1O75385 1050 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 ACTL6AO96019 429 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 ABHD2P08910 425 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 CYP4B1P13584 511 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 PTPN6P29350 595 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 IL12BP29460 328 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 TIMP3P35625 211 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 DLX5P56178 289 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 PSPHP78330 225 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 ACSM2AQ08AH3 577 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 GALNT1Q10472 559 aaPredicted RBP10.76□□□□□ -0.69
TTC28-203ENST00000442232 HEPACAMQ14CZ8 416 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 TESK1Q15569 626 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 FLYWCH1Q4VC44 716 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 EIPR1Q53HC9 387 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 SPIN4Q56A73 249 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 NHSL2Q5HYW2 709 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 WIPI1Q5MNZ9 446 aaPredicted RBP10.76□□□□□ -0.69
TTC28-203ENST00000442232 NSUN5P2Q63ZY6 315 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 ACSM2BQ68CK6 577 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 TIGD3Q6B0B8 471 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 VASNQ6EMK4 673 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 SLC22A9Q8IVM8 553 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 GBP7Q8N8V2 638 aaPredicted RBP10.76□□□□□ -0.69
TTC28-203ENST00000442232 NOA1Q8NC60 698 aaKnown RBP10.76□□□□□ -0.69
TTC28-203ENST00000442232 FAM83FQ8NEG4 500 aaPredicted RBP10.76□□□□□ -0.69
TTC28-203ENST00000442232 OR14L1PQ8NHC6 308 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 GOT1L1Q8NHS2 421 aaPredicted RBP10.76□□□□□ -0.69
TTC28-203ENST00000442232 METTL6Q8TCB7 284 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 NINJ1Q92982 152 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 TM4SF18Q96CE8 201 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 ZNF382Q96SR6 550 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 HBEGFQ99075 208 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 GPATCH1Q9BRR8 931 aaKnown RBP10.76□□□□□ -0.69
TTC28-203ENST00000442232 UGT2B28Q9BY64 529 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 UBQLN3Q9H347 655 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 CES1P1Q9UKY3 287 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 DTX4Q9Y2E6 619 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 PLLPQ9Y342 182 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 DOCK7Q96N67 2140 aa10.76□□□□□ -0.69
TTC28-203ENST00000442232 FRG2CA6NGY1 282 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 CD8B2A6NJW9 211 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 H0Y3Z8 333 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 REM1O75628 298 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 CBR3O75828 277 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 CBX7O95931 251 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 IL3P08700 152 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 DRD2P14416 443 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 PCSK2P16519 638 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 BMP7P18075 431 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 S1PR1P21453 382 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 ATP5F1P24539 256 aaPredicted RBP10.75□□□□□ -0.69
TTC28-203ENST00000442232 DNASE1P24855 282 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 DNAJA1P31689 397 aaKnown RBP10.75□□□□□ -0.69
TTC28-203ENST00000442232 CEACAM8P31997 349 aaPredicted RBP10.75□□□□□ -0.69
TTC28-203ENST00000442232 OPRM1P35372 400 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 HSD17B3P37058 310 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 PPICP45877 212 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 GSTM5P46439 218 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 PKNOX1P55347 436 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 WNT3P56703 355 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 MRPS22P82650 360 aaKnown RBP10.75□□□□□ -0.69
TTC28-203ENST00000442232 EFR3AQ14156 821 aa10.75□□□□□ -0.69
TTC28-203ENST00000442232 LTB4RQ15722 352 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms