RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 DTX4Q9Y2E6 619 aa13.88□□□□□ -0.19
CSNK1E-210ENST00000442216 NPFFR2Q9Y5X5 522 aa13.88□□□□□ -0.19
CSNK1E-210ENST00000442216 SVILO95425 2214 aa13.88□□□□□ -0.19
CSNK1E-210ENST00000442216 FRG2CA6NGY1 282 aa13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 TTC36A6NLP5 189 aa13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 TO15178 435 aa13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 KITP10721 976 aa13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 EDN3P14138 238 aa13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 PTGER1P34995 402 aa13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 MANFP55145 182 aaKnown RBP13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 CPTPQ5TA50 214 aa13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 SLC22A10Q63ZE4 541 aa13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 ANKRD26P1Q6NSI1 321 aa13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 MDGA2Q7Z553 956 aa13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 SPATA19Q7Z5L4 167 aa13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 SULF2Q8IWU5 870 aa13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 ST6GALNAC3Q8NDV1 305 aa13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 SIMC1Q8NDZ2 872 aa13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 PAQR8Q8TEZ7 354 aa13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 CKAP2Q8WWK9 683 aa13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 CIDECQ96AQ7 238 aaPredicted RBP13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 MAGEB18Q96M61 343 aa13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 FRMD6Q96NE9 622 aa13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 BTBD9Q96Q07 612 aa13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 SECISBP2Q96T21 854 aaKnown RBP13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 ITPAQ9BY32 194 aa13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 BHLHE41Q9C0J9 482 aaPredicted RBP13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 NXF5Q9H1B4 397 aaKnown RBP13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 SACM1LQ9NTJ5 587 aa13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 CNIH4Q9P003 139 aa13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 NTMQ9P121 344 aa13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 MARCOQ9UEW3 520 aaPredicted RBP13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 GPR55Q9Y2T6 319 aaPredicted RBP13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 NBASA2RRP1 2371 aa13.87□□□□□ -0.19
CSNK1E-210ENST00000442216 TCP11X1B4DZS4 312 aa13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 UPK1AO00322 258 aa13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 ZNF195O14628 629 aa13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 TP53I11O14683 189 aa13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 PEX1O43933 1283 aa13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 ERN1O75460 977 aaKnown RBP13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 TGDSO95455 350 aa13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 PSMG1O95456 288 aa13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 CBX6O95503 412 aa13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 P04436 131 aa13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 CNR1P21554 472 aa13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 MC3RP41968 323 aa13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 DIO3P55073 304 aa13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 RPP38P78345 283 aaKnown RBP13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 RPS6KA2Q15349 733 aa13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 DPY19L1Q2PZI1 675 aa13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 HSP90B2PQ58FF3 399 aa13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 TMEM107Q6UX40 140 aa13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 RGS9BPQ6ZS82 235 aa13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 ZNF551Q7Z340 670 aaPredicted RBP13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 ARFGAP2Q8N6H7 521 aa13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 ZFP62Q8NB50 900 aaPredicted RBP13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 OR7A2PQ8NGA2 310 aa13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 PSMA8Q8TAA3 256 aa13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 ACTRT2Q8TDY3 377 aa13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 VSTM2LQ96N03 204 aa13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 DPY30Q9C005 99 aa13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 FOLH1BQ9HBA9 442 aa13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 MED4Q9NPJ6 270 aa13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 DDX18Q9NVP1 670 aaKnown RBP13.86□□□□□ -0.19
CSNK1E-210ENST00000442216 GTF3C1Q12789 2109 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 FASNP49327 2511 aaKnown RBP13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 A0A1W2PRB8 838 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 ANKRD33BA6NCL7 494 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 ANKRD28O15084 1053 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 CT45A8P0DMV1 189 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 CT45A9P0DMV2 189 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 LAMP1P11279 417 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 ABCD3P28288 659 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 EPHA3P29320 983 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 GPC1P35052 558 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 MEOX1P50221 254 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 TDGF1P3P51864 188 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 CLNS1AP54105 237 aaKnown RBP13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 ALDH6A1Q02252 535 aaKnown RBP13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 SRSF11Q05519 484 aaKnown RBP13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 HSPB3Q12988 150 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 LSM12Q3MHD2 195 aaKnown RBP13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 KRTCAP3Q53RY4 240 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 CT45A2Q5DJT8 189 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 TBCELQ5QJ74 424 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 TMEM81Q6P7N7 255 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 BNC2Q6ZN30 1099 aaPredicted RBP13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 SLC34A3Q8N130 599 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 FBXW8Q8N3Y1 598 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 KRTCAP2Q8N6L1 136 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 OR8J2Q8NGG1 315 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 CEP70Q8NHQ1 597 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 OR5P2Q8WZ92 322 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 TESCQ96BS2 214 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 FAM173AQ9BQD7 235 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 DUSP26Q9BV47 211 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 ANKRA2Q9H9E1 313 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 C3orf14Q9HBI5 128 aa13.85□□□□□ -0.19
CSNK1E-210ENST00000442216 AIG1Q9NVV5 245 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms