RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 CXCR4P61073 352 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 EEF1A2Q05639 463 aaKnown RBP6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 DMPKQ09013 629 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 KEAP1Q14145 624 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 NIPAL1Q6NVV3 410 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 PIWIL3Q7Z3Z3 882 aaKnown RBP6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 OR2L3Q8NG85 312 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 CHAC2Q8WUX2 184 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 ZNF480Q8WV37 535 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 SNRNP27Q8WVK2 155 aaKnown RBP6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 ZNF347Q96SE7 839 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 MTERF1Q99551 399 aaKnown RBP6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 OR8D2Q9GZM6 311 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 ING2Q9H160 280 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 FOXJ2Q9P0K8 574 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 SNX6Q9UNH7 406 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 ICKQ9UPZ9 632 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 ANKRD11Q6UB99 2663 aaPredicted RBP6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 hCG_2014768A0A024R1R8 64 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 A0A096LPI6 279 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 KRT87PA6NCN2 255 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 CCDC160A6NGH7 325 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 G3V2T6 193 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 SEC24DO94855 1032 aaPredicted RBP6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 RECKO95980 971 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 F10P00742 488 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 PGRP06401 933 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 RNH1P13489 461 aaKnown RBP6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 NT5EP21589 574 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 EPHA2P29317 976 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 XCR1P46094 333 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 UBE2IP63279 158 aaKnown RBP6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 OLR1P78380 273 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 DNAH14Q0VDD8 3507 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 ZIK1Q3SY52 487 aaPredicted RBP6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 SPANXN4Q5MJ08 99 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 ZNF614Q8N883 585 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 GLB1L3Q8NCI6 653 aaPredicted RBP6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 NSMCE2Q96MF7 247 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 INPP5KQ9BT40 448 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 IPPKQ9H8X2 491 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 PTGFRNQ9P2B2 879 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 PNMA8BQ9ULN7 279 aaPredicted RBP6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 PDE10AQ9Y233 779 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 PLXND1Q9Y4D7 1925 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 SPTBN1Q01082 2364 aaKnown RBP6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 RNF103-CHMP3A0A140T963 221 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 C1orf226A1L170 272 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 PRAMEF25A6NGN4 478 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 J3QRK9 145 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 MANBAO00462 879 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 SLC16A5O15375 505 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 NDUFB5O43674 189 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 CREG1O75629 220 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 PRKD3O94806 890 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 SCELO95171 688 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 BCKDHAP12694 445 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 CD22P20273 847 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 CSF2RBP32927 897 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 PSMD7P51665 324 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 MVDP53602 400 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 CLDN8P56748 225 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 CDKL4Q5MAI5 379 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 CHMP1BQ7LBR1 199 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 MICU2Q8IYU8 434 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 L3MBTL4Q8NA19 623 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 OR9A4Q8NGU2 314 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 OR10A6Q8NH74 314 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 OR5K1Q8NHB7 308 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 CT55Q8WUE5 264 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 FBXL8Q96CD0 374 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 HBEGFQ99075 208 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 DDA1Q9BW61 102 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 PRTFDC1Q9NRG1 225 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 SH3BP4Q9P0V3 963 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 ABCG2Q9UNQ0 655 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 SH3GLB1Q9Y371 365 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 OR10H1Q9Y4A9 318 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 SPTBN5Q9NRC6 3674 aaKnown RBP6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 VCANP13611 3396 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 CXCR6O00574 342 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 TM4SF5O14894 197 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 ULK1O75385 1050 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 DEAF1O75398 565 aaPredicted RBP6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 RDH16O75452 317 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 KCNH1O95259 989 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 IL6P05231 212 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 FHP07954 510 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 EFNA1P20827 205 aaPredicted RBP6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 TACR1P25103 407 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 PKLRP30613 574 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 CFHR1Q03591 330 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 ZNF33BQ06732 778 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 NEDD8Q15843 81 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 CCSMST1Q4G0I0 132 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 ASB18Q6ZVZ8 466 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 HORMAD2Q8N7B1 307 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 KCT2Q8NC54 265 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 ITPKCQ96DU7 683 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 SLC47A1Q96FL8 570 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms