RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 TSPAN16Q9UKR8 245 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 MRPL11Q9Y3B7 192 aaKnown RBP3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 MMP24Q9Y5R2 645 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 CPQQ9Y646 472 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 ARPC4-TTLL3A0A0A6YYG9 625 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 TRIM49BA6NDI0 452 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 C5orf51A6NDU8 294 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 MEI4A8MW99 385 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 SGK1O00141 431 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 AP3B1O00203 1094 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 EEF2KO00418 725 aaKnown RBP3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 POLR3GO15318 223 aaPredicted RBP3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 TSPAN2O60636 221 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 SH3BGRLO75368 114 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 ANXA9O76027 345 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 OR6B1O95007 311 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 STBD1O95210 358 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 SMC2O95347 1197 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 HIST1H2AGP0C0S8 130 aaPredicted RBP3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 B4GALT1P15291 398 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 AREGP15514 252 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 CALML3P27482 149 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 RDXP35241 583 aaKnown RBP3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 ID1P41134 155 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 RABIFP47224 123 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 ATP5OP48047 213 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 GEMP55040 296 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 ADARP55265 1226 aaKnown RBP3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 SSTP61278 116 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 RPL27P61353 136 aaKnown RBP3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 GBE1Q04446 702 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 CCDC173Q0VFZ6 552 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 EMC2Q15006 297 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 KRT31Q15323 416 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 P2RY14Q15391 338 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 IMMTQ16891 758 aaKnown RBP3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 VWA2Q5GFL6 755 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 RIPPLY2Q5TAB7 128 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 REP15Q6BDI9 236 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 Q6ZRG5 221 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 CCDC80Q76M96 950 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 SERPINA12Q8IW75 414 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 CCDC65Q8IXS2 484 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 LINC00469Q8N7U9 141 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 SPERTQ8NA61 448 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 HIST1H2ACQ93077 130 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 SLCO4A1Q96BD0 722 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 C14orf79Q96F83 325 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 DHTKD1Q96HY7 919 aaPredicted RBP3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 C8orf76Q96K31 380 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 CXorf58Q96LI9 332 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 SH3GL1Q99961 368 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 THUMPD2Q9BTF0 503 aaKnown RBP3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 CARD6Q9BX69 1037 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 ADNPQ9H2P0 1102 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 DCLRE1BQ9H816 532 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 FAM212BQ9NTI7 297 aaPredicted RBP3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 TECRQ9NZ01 308 aaKnown RBP3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 CHMP5Q9NZZ3 219 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 ANKMY1Q9P2S6 941 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 TRIM10Q9UDY6 481 aa3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.03□□□□□ -1.92
LSM1P1-201ENST00000438629 FAM205AQ6ZU69 1335 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 SALL1Q9NSC2 1324 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 IGHV3-16A0A0C4DH30 117 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 CFAP73A6NFT4 308 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 ZNF724A8MTY0 619 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 SHISA9B4DS77 424 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 ARPC1BO15143 372 aaKnown RBP3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 CLDN3O15551 220 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 NME2P1O60361 137 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 NMT2O60551 498 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 ZNF254O75437 659 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 RHOBTB1O94844 696 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 ADCY5O95622 1261 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 CALCAP01258 141 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 FCER2P06734 321 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 ABHD2P08910 425 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 ZNF24P17028 368 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 SFNP31947 248 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 MDH1P40925 334 aaKnown RBP3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 ELK3P41970 407 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 ACADSBP45954 432 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 GBX2P52951 348 aaPredicted RBP3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 ARFIP1P53367 373 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 ACTR1AP61163 376 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 PPP1R8Q12972 351 aaKnown RBP3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 SNX1Q13596 522 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 TPD52L1Q16890 204 aaPredicted RBP3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 MAJINQ3KP22 176 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 ZNF506Q5JVG8 444 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 ATAD3BQ5T9A4 648 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 RAET1GQ6H3X3 334 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 RHBDD2Q6NTF9 364 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 SLC25A24Q6NUK1 477 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 ARMCX5Q6P1M9 558 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 P2RY8Q86VZ1 359 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 MARCH9Q86YJ5 346 aa3.02□□□□□ -1.93
LSM1P1-201ENST00000438629 ELMOD2Q8IZ81 293 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms