RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 SMPD3Q9NY59 655 aaPredicted RBP11.53□□□□□ -0.56
UBE3B-203ENST00000434735 REXO2Q9Y3B8 237 aaKnown RBP11.53□□□□□ -0.56
UBE3B-203ENST00000434735 RPL36Q9Y3U8 105 aaKnown RBP11.53□□□□□ -0.56
UBE3B-203ENST00000434735 PLEKHM1Q9Y4G2 1056 aa11.53□□□□□ -0.56
UBE3B-203ENST00000434735 PAPPA2Q9BXP8 1791 aa11.52□□□□□ -0.56
UBE3B-203ENST00000434735 G6PDP11413 515 aa11.52□□□□□ -0.56
UBE3B-203ENST00000434735 FUT4P22083 530 aa11.52□□□□□ -0.56
UBE3B-203ENST00000434735 SCAPQ12770 1279 aa11.52□□□□□ -0.56
UBE3B-203ENST00000434735 RBM39Q14498 530 aaKnown RBP11.52□□□□□ -0.56
UBE3B-203ENST00000434735 IDNKQ5T6J7 187 aa11.52□□□□□ -0.56
UBE3B-203ENST00000434735 BEND4Q6ZU67 534 aa11.52□□□□□ -0.56
UBE3B-203ENST00000434735 PTRH1Q86Y79 214 aaKnown RBP11.52□□□□□ -0.56
UBE3B-203ENST00000434735 OR5P2Q8WZ92 322 aa11.52□□□□□ -0.56
UBE3B-203ENST00000434735 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 DPPA5A6NC42 116 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 E2F3O00716 465 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 POU3F4P49335 361 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 ARSDP51689 593 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 MADCAM1Q13477 382 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 PDE7AQ13946 482 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 ESCO2Q56NI9 601 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 KLHL36Q8N4N3 616 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 SLC37A2Q8TED4 501 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 CCDC107Q8WV48 283 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 MOCOSQ96EN8 888 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 SRA1Q9HD15 236 aaKnown RBP11.52□□□□□ -0.57
UBE3B-203ENST00000434735 C12orf4Q9NQ89 552 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 OXSMQ9NWU1 459 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 KCNS2Q9ULS6 477 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 FARSAQ9Y285 508 aaKnown RBP11.52□□□□□ -0.57
UBE3B-203ENST00000434735 PLEKHA6Q9Y2H5 1048 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 PRSS51A0A1B0GVH4 220 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 BTBD17A6NE02 478 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 TMEM233B4DJY2 109 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 EDF1O60869 148 aaKnown RBP11.52□□□□□ -0.57
UBE3B-203ENST00000434735 NELFEP18615 380 aaKnown RBP11.52□□□□□ -0.57
UBE3B-203ENST00000434735 UQCRC2P22695 453 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 MAD2L1BPQ15013 274 aaPredicted RBP11.52□□□□□ -0.57
UBE3B-203ENST00000434735 NPTX1Q15818 432 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 ZNF619Q8N2I2 560 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 ZNF808Q8N4W9 903 aaPredicted RBP11.52□□□□□ -0.57
UBE3B-203ENST00000434735 OR51A7Q8NH64 312 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 BBS10Q8TAM1 723 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 ROPN1LQ96C74 230 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 CIB1Q99828 191 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 STRA6Q9BX79 667 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 CXCL16Q9H2A7 254 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 AKTIPQ9H8T0 292 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 PARPBPQ9NWS1 579 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 CCDC59Q9P031 241 aaKnown RBP11.52□□□□□ -0.57
UBE3B-203ENST00000434735 RHCGQ9UBD6 479 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 IGHV3-20A0A0C4DH32 117 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 DRD2P14416 443 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 GSTM3P21266 225 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 CRYZQ08257 329 aaKnown RBP11.52□□□□□ -0.57
UBE3B-203ENST00000434735 PRAMEF17Q5VTA0 474 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 ZBTB46Q86UZ6 589 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 PAQR7Q86WK9 346 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 CHCHD4Q8N4Q1 142 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 OR5T2Q8NGG2 359 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 MYRFLQ96LU7 910 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 ZNF597Q96LX8 424 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 TTYH2Q9BSA4 534 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 SEMA4GQ9NTN9 838 aa11.52□□□□□ -0.57
UBE3B-203ENST00000434735 ZNF223Q9UK11 482 aaPredicted RBP11.52□□□□□ -0.57
UBE3B-203ENST00000434735 POM121BA6NF01 834 aa11.51□□□□□ -0.57
UBE3B-203ENST00000434735 ZNF891A8MT65 544 aaPredicted RBP11.51□□□□□ -0.57
UBE3B-203ENST00000434735 METTL12A8MUP2 240 aa11.51□□□□□ -0.57
UBE3B-203ENST00000434735 CXorf49A8MYA2 514 aaPredicted RBP11.51□□□□□ -0.57
UBE3B-203ENST00000434735 J3QRK9 145 aa11.51□□□□□ -0.57
UBE3B-203ENST00000434735 DDCP20711 480 aa11.51□□□□□ -0.57
UBE3B-203ENST00000434735 EIF2S3LQ2VIR3 472 aaKnown RBP11.51□□□□□ -0.57
UBE3B-203ENST00000434735 LIN52Q52LA3 116 aa11.51□□□□□ -0.57
UBE3B-203ENST00000434735 TMEM196Q5HYL7 178 aa11.51□□□□□ -0.57
UBE3B-203ENST00000434735 NADSYN1Q6IA69 706 aa11.51□□□□□ -0.57
UBE3B-203ENST00000434735 RSPO2Q6UXX9 243 aaPredicted RBP11.51□□□□□ -0.57
UBE3B-203ENST00000434735 NAXDQ8IW45 347 aa11.51□□□□□ -0.57
UBE3B-203ENST00000434735 ARFGAP1Q8N6T3 406 aa11.51□□□□□ -0.57
UBE3B-203ENST00000434735 LRRC57Q8N9N7 239 aa11.51□□□□□ -0.57
UBE3B-203ENST00000434735 CA5BP1Q8WTZ4 195 aa11.51□□□□□ -0.57
UBE3B-203ENST00000434735 GCDHQ92947 438 aaPredicted RBP11.51□□□□□ -0.57
UBE3B-203ENST00000434735 SMIM14Q96QK8 99 aa11.51□□□□□ -0.57
UBE3B-203ENST00000434735 HOXD1Q9GZZ0 328 aa11.51□□□□□ -0.57
UBE3B-203ENST00000434735 MKRN2Q9H000 416 aaKnown RBP11.51□□□□□ -0.57
UBE3B-203ENST00000434735 METTL8Q9H825 291 aaKnown RBP11.51□□□□□ -0.57
UBE3B-203ENST00000434735 PELI2Q9HAT8 420 aa11.51□□□□□ -0.57
UBE3B-203ENST00000434735 C1GALT1Q9NS00 363 aa11.51□□□□□ -0.57
UBE3B-203ENST00000434735 ARL8BQ9NVJ2 186 aa11.51□□□□□ -0.57
UBE3B-203ENST00000434735 VNN3Q9NY84 501 aa11.51□□□□□ -0.57
UBE3B-203ENST00000434735 DUSP13Q9UII6 198 aa11.51□□□□□ -0.57
UBE3B-203ENST00000434735 SALL4Q9UJQ4 1053 aa11.51□□□□□ -0.57
UBE3B-203ENST00000434735 M0R129 80 aa11.51□□□□□ -0.57
UBE3B-203ENST00000434735 RETP07949 1114 aa11.51□□□□□ -0.57
UBE3B-203ENST00000434735 RBM34P42696 430 aaKnown RBP11.51□□□□□ -0.57
UBE3B-203ENST00000434735 OR7A5Q15622 319 aa11.51□□□□□ -0.57
UBE3B-203ENST00000434735 PGAM4Q8N0Y7 254 aa11.51□□□□□ -0.57
UBE3B-203ENST00000434735 OR52P1PQ8NH57 321 aa11.51□□□□□ -0.57
UBE3B-203ENST00000434735 OR1E3Q8WZA6 343 aa11.51□□□□□ -0.57
UBE3B-203ENST00000434735 IP6K3Q96PC2 410 aa11.51□□□□□ -0.57
UBE3B-203ENST00000434735 ACTR6Q9GZN1 396 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms