RNA–Protein interactions for RNA: ENST00000432945.1

HMGN1P33-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 33, humanhuman

BASIC

Gene HMGN1P33, Length 451 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P33-201ENST00000432945 NUS1Q96E22 293 aa0.74□□□□□ -2.29
HMGN1P33-201ENST00000432945 ALKBH3Q96Q83 286 aaPredicted RBP0.74□□□□□ -2.29
HMGN1P33-201ENST00000432945 TGS1Q96RS0 853 aaKnown RBP0.74□□□□□ -2.29
HMGN1P33-201ENST00000432945 PCDHB18PQ96TA0 734 aa0.74□□□□□ -2.29
HMGN1P33-201ENST00000432945 PSMD1Q99460 953 aa0.74□□□□□ -2.29
HMGN1P33-201ENST00000432945 PAFAH2Q99487 392 aa0.74□□□□□ -2.29
HMGN1P33-201ENST00000432945 HSD17B14Q9BPX1 270 aa0.74□□□□□ -2.29
HMGN1P33-201ENST00000432945 RTBDNQ9BSG5 229 aaPredicted RBP0.74□□□□□ -2.29
HMGN1P33-201ENST00000432945 MXD3Q9BW11 206 aa0.74□□□□□ -2.29
HMGN1P33-201ENST00000432945 PINK1Q9BXM7 581 aa0.74□□□□□ -2.29
HMGN1P33-201ENST00000432945 ITPAQ9BY32 194 aa0.74□□□□□ -2.29
HMGN1P33-201ENST00000432945 ANKZF1Q9H8Y5 726 aa0.74□□□□□ -2.29
HMGN1P33-201ENST00000432945 RPF1Q9H9Y2 349 aaKnown RBP0.74□□□□□ -2.29
HMGN1P33-201ENST00000432945 UBE2TQ9NPD8 197 aaPredicted RBP0.74□□□□□ -2.29
HMGN1P33-201ENST00000432945 SEPT11Q9NVA2 429 aaKnown RBP0.74□□□□□ -2.29
HMGN1P33-201ENST00000432945 CLIC5Q9NZA1 410 aa0.74□□□□□ -2.29
HMGN1P33-201ENST00000432945 ZNF319Q9P2F9 582 aa0.74□□□□□ -2.29
HMGN1P33-201ENST00000432945 AASSQ9UDR5 926 aa0.74□□□□□ -2.29
HMGN1P33-201ENST00000432945 ZNF282Q9UDV7 671 aaPredicted RBP0.74□□□□□ -2.29
HMGN1P33-201ENST00000432945 UBQLN2Q9UHD9 624 aa0.74□□□□□ -2.29
HMGN1P33-201ENST00000432945 RPS6KL1Q9Y6S9 549 aa0.74□□□□□ -2.29
HMGN1P33-201ENST00000432945 ARFGEF3Q5TH69 2177 aa0.74□□□□□ -2.29
HMGN1P33-201ENST00000432945 MYLKQ15746 1914 aa0.74□□□□□ -2.29
HMGN1P33-201ENST00000432945 METP08581 1390 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 LOC102723996A0A087X1L8 192 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 C2orf92A0A1B0GVN3 265 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 CASTOR2A6NHX0 329 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 B4E171 279 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 ERVV-1B6SEH8 477 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 PHGR1C9JFL3 82 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 K7EQG2 157 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 FBP2O00757 339 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 LRRTM2O43300 516 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 DFNA5O60443 496 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 ZNF253O75346 499 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 PEX14O75381 377 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 CA11O75493 328 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 EIF3JO75822 258 aaKnown RBP0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 PENKP01210 267 aaPredicted RBP0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 SNRPCP09234 159 aaKnown RBP0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 HSD17B1P14061 328 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 COX6B1P14854 86 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 CHRNA3P32297 505 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 MDH2P40926 338 aaKnown RBP0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 TSPAN7P41732 249 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 ALDH3B1P43353 468 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 CLNS1AP54105 237 aaKnown RBP0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 CDH13P55290 713 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 STX17P56962 302 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 SULT2A1Q06520 285 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 RALGDSQ12967 914 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 BAATQ14032 418 aaPredicted RBP0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 NONOQ15233 471 aaKnown RBP eCLIP0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 LTB4RQ15722 352 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 ALFQ53S48 1182 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 ZNF658Q5TYW1 1059 aaPredicted RBP0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 AGAP6Q5VW22 663 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 KRT39Q6A163 491 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 IRGCQ6NXR0 463 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 TATDN1Q6P1N9 297 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 TTC27Q6P3X3 843 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 C15orf52Q6ZUT6 534 aaKnown RBP0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 TOM1L2Q6ZVM7 507 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 Q6ZVQ6 151 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 NUFIP2Q7Z417 695 aaKnown RBP0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 PHLDB2Q86SQ0 1253 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 APOBEC3FQ8IUX4 373 aaKnown RBP0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 TBC1D10CQ8IV04 446 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 MKXQ8IYA7 352 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 TAGAPQ8N103 731 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 ELMOD1Q8N336 334 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 TEX26Q8N6G2 289 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 C14orf178Q8N769 122 aaPredicted RBP0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 LINC01555Q8NAE3 123 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 CLEC1AQ8NC01 280 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 PHOSPHO2Q8TCD6 241 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 GANCQ8TET4 914 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 PAQR8Q8TEZ7 354 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 RNF138Q8WVD3 245 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 GTSF1Q8WW33 167 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 PRPF31Q8WWY3 499 aaKnown RBP0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 HDAC2Q92769 488 aaKnown RBP0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 FRAT1Q92837 279 aaPredicted RBP0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 NXNL1Q96CM4 212 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 FAM120BQ96EK7 910 aaKnown RBP0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 OR5M11Q96RB7 305 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 TNFRSF13CQ96RJ3 184 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 MCCC1Q96RQ3 725 aaPredicted RBP0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 OLFM1Q99784 485 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 SCRT1Q9BWW7 348 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 NOL11Q9H8H0 719 aaKnown RBP0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 MYNNQ9NPC7 610 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 IL1RAPQ9NPH3 570 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 SH3GLB2Q9NR46 395 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 ABCC13Q9NSE7 274 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 HAUS2Q9NVX0 235 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 TBC1D7Q9P0N9 293 aa0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 CPSF2Q9P2I0 782 aaKnown RBP0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 DBF4Q9UBU7 674 aaPredicted RBP0.73□□□□□ -2.29
HMGN1P33-201ENST00000432945 CCPG1Q9ULG6 757 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms