RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 NIP7Q9Y221 180 aaKnown RBP eCLIP2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 LRP5O75197 1615 aa2.59□□□□□ -1.99
HMGB1P27-201ENST00000431429 IQGAP1P46940 1657 aa2.59□□□□□ -2
HMGB1P27-201ENST00000431429 PCNX3Q9H6A9 2034 aa2.59□□□□□ -2
HMGB1P27-201ENST00000431429 LRPPRCP42704 1394 aaKnown RBP2.59□□□□□ -2
HMGB1P27-201ENST00000431429 MTUS2Q5JR59 1369 aa2.59□□□□□ -2
HMGB1P27-201ENST00000431429 PNPLA6Q8IY17 1366 aa2.59□□□□□ -2
HMGB1P27-201ENST00000431429 CCNB3Q8WWL7 1395 aa2.59□□□□□ -2
HMGB1P27-201ENST00000431429 PIK3R4Q99570 1358 aa2.59□□□□□ -2
HMGB1P27-201ENST00000431429 PHLPP1O60346 1717 aa2.59□□□□□ -2
HMGB1P27-201ENST00000431429 ATRNO75882 1429 aa2.59□□□□□ -2
HMGB1P27-201ENST00000431429 RALGAPBQ86X10 1494 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 IGHV3OR16-10A0A075B7F0 116 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 A0A087WZY1 265 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 A0A1B0GUL7 405 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 FAM230AA0A1W2PPH8 454 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 A0A1W2PPR1 153 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 FBLL1A6NHQ2 334 aaKnown RBP2.58□□□□□ -2
HMGB1P27-201ENST00000431429 NTN3O00634 580 aaPredicted RBP2.58□□□□□ -2
HMGB1P27-201ENST00000431429 NDC80O14777 642 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 TFECO14948 347 aaPredicted RBP2.58□□□□□ -2
HMGB1P27-201ENST00000431429 ZG16O60844 167 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 OAS1P00973 400 aaKnown RBP2.58□□□□□ -2
HMGB1P27-201ENST00000431429 IFNB1P01574 187 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 IGKV3-20P01619 116 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 HCKP08631 526 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 EZRP15311 586 aaKnown RBP2.58□□□□□ -2
HMGB1P27-201ENST00000431429 AOC1P19801 751 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 UGT1A4P22310 534 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 MT3P25713 68 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 TMOD1P28289 359 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 RPL9P32969 192 aaKnown RBP2.58□□□□□ -2
HMGB1P27-201ENST00000431429 ADRA1AP35348 466 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 HSD17B7P56937 341 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 RPS27AP62979 156 aaKnown RBP2.58□□□□□ -2
HMGB1P27-201ENST00000431429 FKBP3Q00688 224 aaKnown RBP2.58□□□□□ -2
HMGB1P27-201ENST00000431429 PRKCEQ02156 737 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 KLHL30Q0D2K2 578 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 ENPP2Q13822 863 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 FASTKQ14296 549 aaKnown RBP2.58□□□□□ -2
HMGB1P27-201ENST00000431429 FASTKD3Q14CZ7 662 aaKnown RBP2.58□□□□□ -2
HMGB1P27-201ENST00000431429 ZNF146Q15072 292 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 CARTPTQ16568 116 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 SHROOM1Q2M3G4 852 aaPredicted RBP2.58□□□□□ -2
HMGB1P27-201ENST00000431429 FAM182AQ5T1J6 154 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 LINC00242Q5T6M2 205 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 GALNT17Q6IS24 598 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 LEG1Q6P5S2 330 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 SLC39A4Q6P5W5 647 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 ASRGL1Q7L266 308 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 NUFIP2Q7Z417 695 aaKnown RBP2.58□□□□□ -2
HMGB1P27-201ENST00000431429 GOLGA7Q7Z5G4 137 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 RANBP3LQ86VV4 465 aaPredicted RBP2.58□□□□□ -2
HMGB1P27-201ENST00000431429 KCNMB4Q86W47 210 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 LINC00518Q8N0U6 118 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 ARFGAP2Q8N6H7 521 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 OR1B1Q8NGR6 318 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 LRRC15Q8TF66 581 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 TAF15Q92804 592 aaKnown RBP eCLIP2.58□□□□□ -2
HMGB1P27-201ENST00000431429 MOCOSQ96EN8 888 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 DTNBP1Q96EV8 351 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 C19orf43Q9BQ61 176 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 CCDC28BQ9BUN5 200 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 RBM24Q9BX46 236 aaKnown RBP2.58□□□□□ -2
HMGB1P27-201ENST00000431429 COQ10BQ9H8M1 238 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 ACTR8Q9H981 624 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 UBE2TQ9NPD8 197 aaPredicted RBP2.58□□□□□ -2
HMGB1P27-201ENST00000431429 DEPPQ9NTK1 212 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 SLC35D1Q9NTN3 355 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 P2RX2Q9UBL9 471 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 PURGQ9UJV8 347 aaKnown RBP2.58□□□□□ -2
HMGB1P27-201ENST00000431429 MGAT4BQ9UQ53 548 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 KLF2Q9Y5W3 355 aaPredicted RBP2.58□□□□□ -2
HMGB1P27-201ENST00000431429 KANK1Q14678 1352 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 DCCP43146 1447 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 RPRD2Q5VT52 1461 aaKnown RBP2.58□□□□□ -2
HMGB1P27-201ENST00000431429 ARHGAP35Q9NRY4 1499 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 ARHGAP23Q9P227 1491 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 SLIT1O75093 1534 aa2.58□□□□□ -2
HMGB1P27-201ENST00000431429 KIF14Q15058 1648 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 NHSL1Q5SYE7 1610 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 ABCA6Q8N139 1617 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 CLTCQ00610 1675 aaKnown RBP2.57□□□□□ -2
HMGB1P27-201ENST00000431429 POLR1AO95602 1720 aaPredicted RBP2.57□□□□□ -2
HMGB1P27-201ENST00000431429 IGLV7-46A0A075B6I9 117 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 IGLV4-3A0A075B6K6 122 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 PDLIM1O00151 329 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 ARHGEF9O43307 516 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 ZNF749O43361 778 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 IDH3BO43837 385 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 TOM1L1O75674 476 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 GOT2P00505 430 aaKnown RBP2.57□□□□□ -2
HMGB1P27-201ENST00000431429 AK1P00568 194 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 CHRNA1P02708 482 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 MBL2P11226 248 aaPredicted RBP2.57□□□□□ -2
HMGB1P27-201ENST00000431429 MATKP42679 507 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 SLC1A6P48664 564 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 HSF2Q03933 536 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 NME3Q13232 169 aa2.57□□□□□ -2
HMGB1P27-201ENST00000431429 NECTIN1Q15223 517 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms