RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 LGALS8O00214 317 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 CTAG2O75638 210 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 SCGNO76038 276 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 LATS1O95835 1130 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 DCTDP32321 178 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 ZNF763Q0D2J5 394 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 ZNF529Q6P280 563 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 ZSCAN4Q8NAM6 433 aaPredicted RBP5.09□□□□□ -1.59
PTPN4-203ENST00000430976 FAM46DQ8NEK8 389 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 ENGASEQ8NFI3 743 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 PROKR2Q8NFJ6 384 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 OR13F1Q8NGS4 319 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 ACTL9Q8TC94 416 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 MRGPRDQ8TDS7 321 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 MYLIPQ8WY64 445 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 MRPS31Q92665 395 aaKnown RBP5.09□□□□□ -1.59
PTPN4-203ENST00000430976 MSI2Q96DH6 328 aaKnown RBP5.09□□□□□ -1.59
PTPN4-203ENST00000430976 DCUN1D1Q96GG9 259 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 IL12RB2Q99665 862 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 TUBB6Q9BUF5 446 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 SMIM3Q9BZL3 60 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 RANGRFQ9HD47 186 aaPredicted RBP5.09□□□□□ -1.59
PTPN4-203ENST00000430976 OR2S2Q9NQN1 319 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 PDGFCQ9NRA1 345 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 KCNK4Q9NYG8 393 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 TMEM9Q9P0T7 183 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 HCN3Q9P1Z3 774 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 XPR1Q9UBH6 696 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 PDE10AQ9Y233 779 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 SF3B1O75533 1304 aaKnown RBP eCLIP5.09□□□□□ -1.594e-7■■■■■ 109.9
PTPN4-203ENST00000430976 XDHP47989 1333 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 LRRC9Q6ZRR7 1453 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 H3BNX3 289 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 FZD9O00144 591 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 CLIC2O15247 247 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 MSH4O15457 936 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 SEPT4O43236 478 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 TGFB1I1O43294 461 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 XRCC2O43543 280 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 MT-ND5P03915 603 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 RAB40ALP0C0E4 278 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 SMIM18P0DKX4 95 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 LTKP29376 864 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 OPRL1P41146 370 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 IDH2P48735 452 aaKnown RBP5.09□□□□□ -1.59
PTPN4-203ENST00000430976 KHKP50053 298 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 LIMK2P53671 638 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 RPS15P62841 145 aaKnown RBP5.09□□□□□ -1.59
PTPN4-203ENST00000430976 NAB2Q15742 525 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 TRMT5Q32P41 509 aaKnown RBP5.09□□□□□ -1.59
PTPN4-203ENST00000430976 DCST2Q5T1A1 773 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 SH3PXD2AQ5TCZ1 1133 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 CDPF1Q6NVV7 123 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 RNF44Q7L0R7 432 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 SLC29A4Q7RTT9 530 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 SLC16A9Q7RTY1 509 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 CARM1Q86X55 608 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 KMT5CQ86Y97 462 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 WFDC8Q8IUA0 241 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 JAGN1Q8N5M9 183 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 RERGQ96A58 199 aaPredicted RBP5.09□□□□□ -1.59
PTPN4-203ENST00000430976 MIB2Q96AX9 1013 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 RAB3CQ96E17 227 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 Q96MT0 163 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 ZSCAN10Q96SZ4 725 aaPredicted RBP5.09□□□□□ -1.59
PTPN4-203ENST00000430976 STACQ99469 402 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 ASPNQ9BXN1 380 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 IL25Q9H293 177 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 C1orf198Q9H425 327 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 NMNAT1Q9HAN9 279 aaPredicted RBP5.09□□□□□ -1.59
PTPN4-203ENST00000430976 GDF3Q9NR23 364 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 USE1Q9NZ43 259 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 MINPP1Q9UNW1 487 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 YBX2Q9Y2T7 364 aaKnown RBP5.09□□□□□ -1.59
PTPN4-203ENST00000430976 ASB1Q9Y576 335 aa5.09□□□□□ -1.59
PTPN4-203ENST00000430976 FAM135AQ9P2D6 1515 aa5.09□□□□□ -1.6
PTPN4-203ENST00000430976 A0A0G2JLW4 131 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 PRAMEF33A0A0G2JMD5 474 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 DCDC2BA2VCK2 349 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 LRIT2A6NDA9 550 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 C4orf47A7E2U8 309 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 E9PAM4 449 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 MRPS14O60783 128 aaKnown RBP5.08□□□□□ -1.6
PTPN4-203ENST00000430976 PRAMEF10O60809 474 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 FKBP6O75344 327 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 ABHD16AO95870 558 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 IGSF6O95976 241 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 CCNE2O96020 404 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 CST3P01034 146 aaPredicted RBP5.08□□□□□ -1.6
PTPN4-203ENST00000430976 GBAP04062 536 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 CHRM2P08172 466 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 SNRPCP09234 159 aaKnown RBP5.08□□□□□ -1.6
PTPN4-203ENST00000430976 DPEP1P16444 411 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 FBLP22087 321 aaKnown RBP5.08□□□□□ -1.6
PTPN4-203ENST00000430976 SLC6A2P23975 617 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 RPL29P47914 159 aaKnown RBP5.08□□□□□ -1.6
PTPN4-203ENST00000430976 RAB5CP51148 216 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 MMP15P51511 669 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 LBX1P52954 281 aa5.08□□□□□ -1.6
PTPN4-203ENST00000430976 SELPLGQ14242 412 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms