RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 PNPLA3Q9NST1 481 aa16.15■□□□□ 0.18
NUP50-208ENST00000430547 SIRT5Q9NXA8 310 aa16.15■□□□□ 0.18
NUP50-208ENST00000430547 EHD3Q9NZN3 535 aa16.15■□□□□ 0.18
NUP50-208ENST00000430547 ZNF639Q9UID6 485 aa16.15■□□□□ 0.18
NUP50-208ENST00000430547 ARHGAP21Q5T5U3 1957 aa16.15■□□□□ 0.18
NUP50-208ENST00000430547 LRRC3CA6NJW4 275 aa16.14■□□□□ 0.17
NUP50-208ENST00000430547 PPM1BO75688 479 aa16.14■□□□□ 0.17
NUP50-208ENST00000430547 RSL1D1O76021 490 aaKnown RBP16.14■□□□□ 0.17
NUP50-208ENST00000430547 CBX7O95931 251 aa16.14■□□□□ 0.17
NUP50-208ENST00000430547 CHEK2O96017 543 aa16.14■□□□□ 0.17
NUP50-208ENST00000430547 RFPL3SP0C7P2 107 aa16.14■□□□□ 0.17
NUP50-208ENST00000430547 NAGAP17050 411 aa16.14■□□□□ 0.17
NUP50-208ENST00000430547 MPIP34949 423 aa16.14■□□□□ 0.17
NUP50-208ENST00000430547 C2orf80Q0P641 193 aa16.14■□□□□ 0.17
NUP50-208ENST00000430547 EMC4Q5J8M3 183 aa16.14■□□□□ 0.17
NUP50-208ENST00000430547 EMBQ6PCB8 327 aa16.14■□□□□ 0.17
NUP50-208ENST00000430547 ACAD11Q709F0 780 aa16.14■□□□□ 0.17
NUP50-208ENST00000430547 TRIM46Q7Z4K8 759 aa16.14■□□□□ 0.17
NUP50-208ENST00000430547 C10orf107Q8IVU9 208 aa16.14■□□□□ 0.17
NUP50-208ENST00000430547 SRRM1Q8IYB3 904 aaKnown RBP16.14■□□□□ 0.17
NUP50-208ENST00000430547 FAM9CQ8IZT9 166 aa16.14■□□□□ 0.17
NUP50-208ENST00000430547 OR9A2Q8NGT5 310 aa16.14■□□□□ 0.17
NUP50-208ENST00000430547 ERP27Q96DN0 273 aa16.14■□□□□ 0.17
NUP50-208ENST00000430547 OMA1Q96E52 524 aa16.14■□□□□ 0.17
NUP50-208ENST00000430547 METTL7AQ9H8H3 244 aa16.14■□□□□ 0.17
NUP50-208ENST00000430547 PROK2Q9HC23 129 aa16.14■□□□□ 0.17
NUP50-208ENST00000430547 SLC35C2Q9NQQ7 365 aa16.14■□□□□ 0.17
NUP50-208ENST00000430547 MKS1Q9NXB0 559 aa16.14■□□□□ 0.17
NUP50-208ENST00000430547 TNFRSF10DQ9UBN6 386 aa16.14■□□□□ 0.17
NUP50-208ENST00000430547 FIS1Q9Y3D6 152 aa16.14■□□□□ 0.17
NUP50-208ENST00000430547 POLR3HQ9Y535 204 aaPredicted RBP16.14■□□□□ 0.17
NUP50-208ENST00000430547 TRIM13O60858 407 aa16.13■□□□□ 0.17
NUP50-208ENST00000430547 SLU7O95391 586 aaKnown RBP16.13■□□□□ 0.17
NUP50-208ENST00000430547 SNRPB2P08579 225 aaKnown RBP16.13■□□□□ 0.17
NUP50-208ENST00000430547 DDCP20711 480 aa16.13■□□□□ 0.17
NUP50-208ENST00000430547 ACVR2AP27037 513 aa16.13■□□□□ 0.17
NUP50-208ENST00000430547 PCLAFQ15004 111 aa16.13■□□□□ 0.17
NUP50-208ENST00000430547 TOMM20Q15388 145 aa16.13■□□□□ 0.17
NUP50-208ENST00000430547 ZNF628Q5EBL2 1059 aa16.13■□□□□ 0.17
NUP50-208ENST00000430547 BICRALQ6AI39 1079 aa16.13■□□□□ 0.17
NUP50-208ENST00000430547 CLEC6AQ6EIG7 209 aa16.13■□□□□ 0.17
NUP50-208ENST00000430547 TRABD2AQ86V40 505 aa16.13■□□□□ 0.17
NUP50-208ENST00000430547 MCEMP1Q8IX19 187 aa16.13■□□□□ 0.17
NUP50-208ENST00000430547 FAM76AQ8TAV0 307 aa16.13■□□□□ 0.17
NUP50-208ENST00000430547 KAT2AQ92830 837 aa16.13■□□□□ 0.17
NUP50-208ENST00000430547 C11orf24Q96F05 449 aaPredicted RBP16.13■□□□□ 0.17
NUP50-208ENST00000430547 TRMOQ9BU70 441 aa16.13■□□□□ 0.17
NUP50-208ENST00000430547 ANGPTL4Q9BY76 406 aa16.13■□□□□ 0.17
NUP50-208ENST00000430547 ACKR4Q9NPB9 350 aa16.13■□□□□ 0.17
NUP50-208ENST00000430547 ALKBH4Q9NXW9 302 aa16.13■□□□□ 0.17
NUP50-208ENST00000430547 HRH3Q9Y5N1 445 aa16.13■□□□□ 0.17
NUP50-208ENST00000430547 PKDREJQ9NTG1 2253 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 FRG2CA6NGY1 282 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 SLC28A1O00337 649 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 AZIN1O14977 448 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 RGS14O43566 566 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 WDR1O75083 606 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 TRIM3O75382 744 aaPredicted RBP16.12■□□□□ 0.17
NUP50-208ENST00000430547 SEC22BO75396 215 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 TRAPPC6AO75865 159 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 ABCB1P08183 1280 aaPredicted RBP16.12■□□□□ 0.17
NUP50-208ENST00000430547 DRD5P21918 477 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 CHRNB4P30926 498 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 NTSP30990 170 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 PTGER4P35408 488 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 KRT20P35900 424 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 CASP3P42574 277 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 PPICP45877 212 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 TRPC1P48995 793 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 EMDP50402 254 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 PMPCAQ10713 525 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 DUSP8Q13202 625 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 CDSNQ15517 529 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 B3GNT6Q6ZMB0 384 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 NUP54Q7Z3B4 507 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 TICAM1Q8IUC6 712 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 HOMEZQ8IX15 550 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 MARVELD2Q8N4S9 558 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 BANPQ8N9N5 519 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 SIMC1Q8NDZ2 872 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 OR10Q1Q8NGQ4 319 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 FAM111AQ96PZ2 611 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 ROPN1BQ9BZX4 212 aaPredicted RBP16.12■□□□□ 0.17
NUP50-208ENST00000430547 STMN4Q9H169 189 aaPredicted RBP16.12■□□□□ 0.17
NUP50-208ENST00000430547 SLC6A15Q9H2J7 730 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 ROPN1Q9HAT0 212 aaPredicted RBP16.12■□□□□ 0.17
NUP50-208ENST00000430547 MYNNQ9NPC7 610 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 KLRF1Q9NZS2 232 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 LGALS13Q9UHV8 139 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 RNF6Q9Y252 685 aa16.12■□□□□ 0.17
NUP50-208ENST00000430547 WBP11Q9Y2W2 641 aaKnown RBP16.12■□□□□ 0.17
NUP50-208ENST00000430547 C15orf38-AP3S2A0A0A6YYH1 394 aa16.11■□□□□ 0.17
NUP50-208ENST00000430547 ERN1O75460 977 aaKnown RBP16.11■□□□□ 0.17
NUP50-208ENST00000430547 NEFHP12036 1026 aa16.11■□□□□ 0.17
NUP50-208ENST00000430547 GABRA1P14867 456 aa16.11■□□□□ 0.17
NUP50-208ENST00000430547 ELAVL4P26378 380 aaKnown RBP16.11■□□□□ 0.17
NUP50-208ENST00000430547 NCBP2P52298 156 aaKnown RBP eCLIP16.11■□□□□ 0.17
NUP50-208ENST00000430547 NUP107P57740 925 aa16.11■□□□□ 0.17
NUP50-208ENST00000430547 NOXRED1Q6NXP6 359 aa16.11■□□□□ 0.17
NUP50-208ENST00000430547 WDR93Q6P2C0 686 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms