RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 SNX6Q9UNH7 406 aa13.6□□□□□ -0.23
MSH5-208ENST00000429846 SLC12A4Q9UP95 1085 aa13.6□□□□□ -0.23
MSH5-208ENST00000429846 DTX4Q9Y2E6 619 aa13.6□□□□□ -0.23
MSH5-208ENST00000429846 SLC6A5Q9Y345 797 aa13.6□□□□□ -0.23
MSH5-208ENST00000429846 KIAA1549Q9HCM3 1950 aa13.6□□□□□ -0.23
MSH5-208ENST00000429846 TUBAL3A6NHL2 446 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 KDM4EB2RXH2 506 aaPredicted RBP13.59□□□□□ -0.23
MSH5-208ENST00000429846 GNB5O14775 395 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 SNPHO15079 494 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 ERAL1O75616 437 aaKnown RBP13.59□□□□□ -0.23
MSH5-208ENST00000429846 KRT38O76015 456 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 IL18BPO95998 194 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 TACR1P25103 407 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 CTSSP25774 331 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 CNTFP26441 200 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 WNT3P56703 355 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 TRA2BP62995 288 aaKnown RBP13.59□□□□□ -0.23
MSH5-208ENST00000429846 SLC7A5Q01650 507 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 PLCXD2Q0VAA5 305 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 EIPR1Q53HC9 387 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 WIPI1Q5MNZ9 446 aaPredicted RBP13.59□□□□□ -0.23
MSH5-208ENST00000429846 SCIMPQ6UWF3 145 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 CAMKMTQ7Z624 323 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 CDC20BQ86Y33 519 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 FAM83FQ8NEG4 500 aaPredicted RBP13.59□□□□□ -0.23
MSH5-208ENST00000429846 ZPLD1Q8TCW7 415 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 SELENOMQ8WWX9 145 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 HGDQ93099 445 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 CTHRC1Q96CG8 243 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 KLHL29Q96CT2 875 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 OMA1Q96E52 524 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 WDYHV1Q96HA8 205 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 LCORQ96JN0 433 aaPredicted RBP13.59□□□□□ -0.23
MSH5-208ENST00000429846 TRIB1Q96RU8 372 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 PAFAH2Q99487 392 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 C1QTNF3Q9BXJ4 246 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 ITPAQ9BY32 194 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 MRPL46Q9H2W6 279 aaKnown RBP13.59□□□□□ -0.23
MSH5-208ENST00000429846 KLRF1Q9NZS2 232 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 BCAP29Q9UHQ4 241 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 MPDZO75970 2070 aa13.59□□□□□ -0.23
MSH5-208ENST00000429846 EPXP11678 715 aa13.58□□□□□ -0.24
MSH5-208ENST00000429846 CYP4B1P13584 511 aa13.58□□□□□ -0.24
MSH5-208ENST00000429846 PSPHP78330 225 aa13.58□□□□□ -0.24
MSH5-208ENST00000429846 MGAT2Q10469 447 aa13.58□□□□□ -0.24
MSH5-208ENST00000429846 GALNT1Q10472 559 aaPredicted RBP13.58□□□□□ -0.24
MSH5-208ENST00000429846 CEBPEQ15744 281 aa13.58□□□□□ -0.24
MSH5-208ENST00000429846 NNATQ16517 81 aa13.58□□□□□ -0.24
MSH5-208ENST00000429846 DCST1Q5T197 706 aa13.58□□□□□ -0.24
MSH5-208ENST00000429846 ANGPTL8Q6UXH0 198 aa13.58□□□□□ -0.24
MSH5-208ENST00000429846 PAMR1Q6UXH9 720 aa13.58□□□□□ -0.24
MSH5-208ENST00000429846 ZNF483Q8TF39 744 aaPredicted RBP13.58□□□□□ -0.24
MSH5-208ENST00000429846 ERP27Q96DN0 273 aa13.58□□□□□ -0.24
MSH5-208ENST00000429846 MBD6Q96DN6 1003 aa13.58□□□□□ -0.24
MSH5-208ENST00000429846 LRRC1Q9BTT6 524 aa13.58□□□□□ -0.24
MSH5-208ENST00000429846 CDC42EP4Q9H3Q1 356 aaKnown RBP13.58□□□□□ -0.24
MSH5-208ENST00000429846 JKAMPQ9P055 326 aa13.58□□□□□ -0.24
MSH5-208ENST00000429846 TRPS1Q9UHF7 1281 aa13.58□□□□□ -0.24
MSH5-208ENST00000429846 ZNF180Q9UJW8 692 aa13.58□□□□□ -0.24
MSH5-208ENST00000429846 EXO1Q9UQ84 846 aaKnown RBP13.58□□□□□ -0.24
MSH5-208ENST00000429846 PLLPQ9Y342 182 aa13.58□□□□□ -0.24
MSH5-208ENST00000429846 ZNF780BQ9Y6R6 833 aa13.58□□□□□ -0.24
MSH5-208ENST00000429846 HRNRQ86YZ3 2850 aaPredicted RBP13.57□□□□□ -0.24
MSH5-208ENST00000429846 FRG2CA6NGY1 282 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 EEF1E1-BLOC1S5C9J1V9 151 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 TO15178 435 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 EEF1E1O43324 174 aaKnown RBP13.57□□□□□ -0.24
MSH5-208ENST00000429846 ABCB7O75027 752 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 ICOSLGO75144 302 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 CBR3O75828 277 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 BCAS2O75934 225 aaPredicted RBP13.57□□□□□ -0.24
MSH5-208ENST00000429846 CBX7O95931 251 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 PDYNP01213 254 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 HSD3B1P14060 373 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 CPN1P15169 458 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 KLK2P20151 261 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 DRD5P21918 477 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 HSD3B2P26439 372 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 FEN1P39748 380 aaKnown RBP13.57□□□□□ -0.24
MSH5-208ENST00000429846 PTGDSP41222 190 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 PPICP45877 212 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 NAGLUP54802 743 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 EXOSC7Q15024 291 aaKnown RBP13.57□□□□□ -0.24
MSH5-208ENST00000429846 SGO1Q5FBB7 561 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 LETMD1Q6P1Q0 360 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 FAM111BQ6SJ93 734 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 ENPP6Q6UWR7 440 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 SAMD14Q8IZD0 417 aaPredicted RBP13.57□□□□□ -0.24
MSH5-208ENST00000429846 ZNF675Q8TD23 568 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 TM4SF18Q96CE8 201 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 TMCO6Q96DC7 493 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 NODALQ96S42 347 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 TM9SF2Q99805 663 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 SFXN3Q9BWM7 321 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 OR2B2Q9GZK3 357 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 ACBD3Q9H3P7 528 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 LIME1Q9H400 295 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 FARSBQ9NSD9 589 aaKnown RBP13.57□□□□□ -0.24
MSH5-208ENST00000429846 PLEKHA6Q9Y2H5 1048 aa13.57□□□□□ -0.24
MSH5-208ENST00000429846 A0A1B0GTL3 188 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms