RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 ALPIP09923 528 aa13.71□□□□□ -0.21
SYNGAP1-203ENST00000428982 PDZK1IP1Q13113 114 aa13.71□□□□□ -0.21
SYNGAP1-203ENST00000428982 OR5T3Q8NGG3 340 aa13.71□□□□□ -0.21
SYNGAP1-203ENST00000428982 LINC01599Q8WXQ3 324 aa13.71□□□□□ -0.21
SYNGAP1-203ENST00000428982 FOXJ1Q92949 421 aa13.71□□□□□ -0.21
SYNGAP1-203ENST00000428982 TRMT2BQ96GJ1 504 aaKnown RBP13.71□□□□□ -0.21
SYNGAP1-203ENST00000428982 FCRL1Q96LA6 429 aa13.71□□□□□ -0.21
SYNGAP1-203ENST00000428982 DPH7Q9BTV6 452 aa13.71□□□□□ -0.21
SYNGAP1-203ENST00000428982 FN3KQ9H479 309 aa13.71□□□□□ -0.21
SYNGAP1-203ENST00000428982 HCSTQ9UBK5 93 aa13.71□□□□□ -0.21
SYNGAP1-203ENST00000428982 MGAT4CQ9UBM8 478 aa13.71□□□□□ -0.21
SYNGAP1-203ENST00000428982 KIAA0355O15063 1070 aa13.71□□□□□ -0.22
SYNGAP1-203ENST00000428982 LDB2O43679 373 aa13.71□□□□□ -0.22
SYNGAP1-203ENST00000428982 GADD45GO95257 159 aa13.71□□□□□ -0.22
SYNGAP1-203ENST00000428982 RFC3P40938 356 aa13.71□□□□□ -0.22
SYNGAP1-203ENST00000428982 SOX3P41225 446 aa13.71□□□□□ -0.22
SYNGAP1-203ENST00000428982 MRPL19P49406 292 aaKnown RBP13.71□□□□□ -0.22
SYNGAP1-203ENST00000428982 SUOXP51687 545 aa13.71□□□□□ -0.22
SYNGAP1-203ENST00000428982 CASP6P55212 293 aa13.71□□□□□ -0.22
SYNGAP1-203ENST00000428982 PSMA6P60900 246 aaKnown RBP13.71□□□□□ -0.22
SYNGAP1-203ENST00000428982 RING1Q06587 406 aa13.71□□□□□ -0.22
SYNGAP1-203ENST00000428982 ABHD18Q0P651 414 aa13.71□□□□□ -0.22
SYNGAP1-203ENST00000428982 SPHARQ15513 63 aa13.71□□□□□ -0.22
SYNGAP1-203ENST00000428982 EIF2S3LQ2VIR3 472 aaKnown RBP13.71□□□□□ -0.22
SYNGAP1-203ENST00000428982 FAM174BQ3ZCQ3 159 aa13.71□□□□□ -0.22
SYNGAP1-203ENST00000428982 BOLLQ8N9W6 283 aaKnown RBP13.71□□□□□ -0.22
SYNGAP1-203ENST00000428982 OR2T4Q8NH00 348 aa13.71□□□□□ -0.22
SYNGAP1-203ENST00000428982 UPRTQ96BW1 309 aa13.71□□□□□ -0.22
SYNGAP1-203ENST00000428982 ABCG8Q9H221 673 aa13.71□□□□□ -0.22
SYNGAP1-203ENST00000428982 MTG2Q9H4K7 406 aa13.71□□□□□ -0.22
SYNGAP1-203ENST00000428982 GORASP2Q9H8Y8 452 aa13.71□□□□□ -0.22
SYNGAP1-203ENST00000428982 SIP14410 1827 aa13.71□□□□□ -0.22
SYNGAP1-203ENST00000428982 ANKDD1BA6NHY2 528 aa13.71□□□□□ -0.22
SYNGAP1-203ENST00000428982 PRAMEF2O60811 474 aa13.71□□□□□ -0.22
SYNGAP1-203ENST00000428982 CRTAPO75718 401 aaPredicted RBP13.71□□□□□ -0.22
SYNGAP1-203ENST00000428982 SPP1P10451 314 aa13.71□□□□□ -0.22
SYNGAP1-203ENST00000428982 SIRT5Q9NXA8 310 aa13.71□□□□□ -0.22
SYNGAP1-203ENST00000428982 FKBPLQ9UIM3 349 aa13.71□□□□□ -0.22
SYNGAP1-203ENST00000428982 V9GYH0 126 aa13.71□□□□□ -0.22
SYNGAP1-203ENST00000428982 A0A1B0GTQ1 180 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 NARSO43776 548 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 RAB30Q15771 203 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 OR2B11Q5JQS5 317 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 TRMT11Q7Z4G4 463 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 CCDC116Q8IYX3 515 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 LIX1Q8N485 282 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 DNAJC22Q8N4W6 341 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 AVL9Q8NBF6 648 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 TMEM145Q8NBT3 493 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 CCDC115Q96NT0 180 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 GAS2L1Q99501 681 aaPredicted RBP13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 ASB8Q9H765 288 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 EEF1E1O43324 174 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 MPZL2O60487 215 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 STK16O75716 305 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 CLUP10909 449 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 G6PDP11413 515 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 MANEALQ5VSG8 457 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 TEX26Q8N6G2 289 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 GAL3ST3Q96A11 431 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 MARVELD1Q9BSK0 173 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 SPATA5L1Q9BVQ7 753 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 EVA1AQ9H8M9 152 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 NUBP2Q9Y5Y2 271 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 ZNF236Q9UL36 1845 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 FAM220BPB1ANY3 271 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 H3BN98 237 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 TNFRSF11BO00300 401 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 UBFD1O14562 309 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 FFAR2O15552 330 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 PCDHGA12O60330 932 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 CLDN9O95484 217 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 LPLP06858 475 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 RPS14P62263 151 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 SMAD2Q15796 467 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 MPPE1Q53F39 396 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 HIST2H2AA3Q6FI13 130 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 FAM122BQ7Z309 247 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 HSD17B13Q7Z5P4 300 aaPredicted RBP13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 SYT12Q8IV01 421 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 FAM86B1Q8N7N1 296 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 HMGCLL1Q8TB92 370 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 CSGALNACT1Q8TDX6 532 aa13.7□□□□□ -0.22
SYNGAP1-203ENST00000428982 MYO9BQ13459 2157 aa13.69□□□□□ -0.22
SYNGAP1-203ENST00000428982 OR6C74A6NCV1 312 aa13.69□□□□□ -0.22
SYNGAP1-203ENST00000428982 RFXAPO00287 272 aa13.69□□□□□ -0.22
SYNGAP1-203ENST00000428982 SCAMP1O15126 338 aa13.69□□□□□ -0.22
SYNGAP1-203ENST00000428982 THEGLP0DJG4 465 aa13.69□□□□□ -0.22
SYNGAP1-203ENST00000428982 ZNF79Q15937 498 aa13.69□□□□□ -0.22
SYNGAP1-203ENST00000428982 LGALSLQ3ZCW2 172 aaPredicted RBP13.69□□□□□ -0.22
SYNGAP1-203ENST00000428982 ZNF852Q6ZMS4 543 aa13.69□□□□□ -0.22
SYNGAP1-203ENST00000428982 GOLGA7Q7Z5G4 137 aa13.69□□□□□ -0.22
SYNGAP1-203ENST00000428982 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.69□□□□□ -0.22
SYNGAP1-203ENST00000428982 OR4F6Q8NGB9 312 aa13.69□□□□□ -0.22
SYNGAP1-203ENST00000428982 OR10K1Q8NGX5 313 aa13.69□□□□□ -0.22
SYNGAP1-203ENST00000428982 UCN3Q969E3 161 aa13.69□□□□□ -0.22
SYNGAP1-203ENST00000428982 FUBP1Q96AE4 644 aaKnown RBP13.69□□□□□ -0.22
SYNGAP1-203ENST00000428982 C3orf49Q96BT1 292 aa13.69□□□□□ -0.22
SYNGAP1-203ENST00000428982 TMEM41AQ96HV5 264 aa13.69□□□□□ -0.22
SYNGAP1-203ENST00000428982 ARL15Q9NXU5 204 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms