RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 WDR70Q9NW82 654 aa10.79□□□□□ -0.68
CECR3-201ENST00000428828 ARL15Q9NXU5 204 aa10.79□□□□□ -0.68
CECR3-201ENST00000428828 CD274Q9NZQ7 290 aa10.79□□□□□ -0.68
CECR3-201ENST00000428828 ZNF624Q9P2J8 865 aaPredicted RBP10.79□□□□□ -0.68
CECR3-201ENST00000428828 PHF11Q9UIL8 331 aa10.79□□□□□ -0.68
CECR3-201ENST00000428828 PRELID3BQ9Y3B1 194 aa10.79□□□□□ -0.68
CECR3-201ENST00000428828 FIS1Q9Y3D6 152 aa10.79□□□□□ -0.68
CECR3-201ENST00000428828 DNAJC15Q9Y5T4 150 aa10.79□□□□□ -0.68
CECR3-201ENST00000428828 OTOGLQ3ZCN5 2332 aa10.79□□□□□ -0.68
CECR3-201ENST00000428828 A0A1W2PQ09 198 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 ZNF98A6NK75 572 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 KERAO60938 352 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 ERN1O75460 977 aaKnown RBP10.78□□□□□ -0.68
CECR3-201ENST00000428828 C1orf105O95561 183 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 TPOP07202 933 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 HIST1H2AGP0C0S8 130 aaPredicted RBP10.78□□□□□ -0.68
CECR3-201ENST00000428828 ZNF806P0C7X5 589 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 MYF5P13349 255 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 HIST1H2ADP20671 130 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 SLC19A1P41440 591 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 RPIAP49247 311 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 HOXA1P49639 335 aaPredicted RBP10.78□□□□□ -0.68
CECR3-201ENST00000428828 FLI1Q01543 452 aaPredicted RBP10.78□□□□□ -0.68
CECR3-201ENST00000428828 SP140Q13342 867 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 ZNF267Q14586 743 aaPredicted RBP10.78□□□□□ -0.68
CECR3-201ENST00000428828 KLHL12Q53G59 568 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 PAGE3Q5JUK9 113 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 CACHD1Q5VU97 1274 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 GPR139Q6DWJ6 353 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 UNC5DQ6UXZ4 953 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 TFAP2EQ6VUC0 442 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 TMPRSS11AQ6ZMR5 421 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 GDPGP1Q6ZNW5 385 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 GALNT10Q86SR1 603 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 GHDCQ8N2G8 530 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 OR52H1Q8NGJ2 320 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 OR5K2Q8NHB8 316 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 SAP25Q8TEE9 199 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 PHF21BQ96EK2 531 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 SLC47A1Q96FL8 570 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 HIST1H2AHQ96KK5 128 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 ATOH8Q96SQ7 321 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 HIST1H2AJQ99878 128 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 PELOQ9BRX2 385 aaKnown RBP10.78□□□□□ -0.68
CECR3-201ENST00000428828 H2AFJQ9BTM1 129 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 IFT46Q9NQC8 304 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 RXFP3Q9NSD7 469 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 SEMA4GQ9NTN9 838 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 PCOLCE2Q9UKZ9 415 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 MAPRE3Q9UPY8 281 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 OARD1Q9Y530 152 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 GMPPBQ9Y5P6 360 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 RNF215Q9Y6U7 377 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 ASCC3Q8N3C0 2202 aaKnown RBP10.78□□□□□ -0.68
CECR3-201ENST00000428828 RPS10-NUDT3A0A1W2PQS6 291 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 GFYI3L273 518 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 BTN3A3O00478 584 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 AZIN1O14977 448 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 VIPP01282 170 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 HLA-DQB1P01920 261 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 RPN2P04844 631 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 SLC2A4P14672 509 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 DBPQ10586 325 aaPredicted RBP10.78□□□□□ -0.68
CECR3-201ENST00000428828 TSTA3Q13630 321 aaPredicted RBP10.78□□□□□ -0.68
CECR3-201ENST00000428828 IRF3Q14653 427 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 ZNF79Q15937 498 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 SYT16Q17RD7 645 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 C18orf21Q32NC0 220 aaPredicted RBP10.78□□□□□ -0.68
CECR3-201ENST00000428828 WASH2PQ6VEQ5 465 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 COMMD7Q86VX2 200 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 DCUN1D3Q8IWE4 304 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 EID2Q8N6I1 236 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 RHEBL1Q8TAI7 183 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 C9orf43Q8TAL5 461 aaPredicted RBP10.78□□□□□ -0.68
CECR3-201ENST00000428828 FANK1Q8TC84 345 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 TWIST2Q8WVJ9 160 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 RHBDF1Q96CC6 855 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 IL17FQ96PD4 163 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 EDEM2Q9BV94 578 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 SLC12A9Q9BXP2 914 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 SHARPINQ9H0F6 387 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 MMP28Q9H239 520 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 KCNH6Q9H252 994 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 PARD6AQ9NPB6 346 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 MED9Q9NWA0 146 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 CUEDC1Q9NWM3 386 aaPredicted RBP10.78□□□□□ -0.68
CECR3-201ENST00000428828 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.78□□□□□ -0.68
CECR3-201ENST00000428828 PSORS1C1Q9UIG5 152 aa10.78□□□□□ -0.68
CECR3-201ENST00000428828 TNPO3Q9Y5L0 923 aaKnown RBP10.78□□□□□ -0.68
CECR3-201ENST00000428828 RP1P56715 2156 aa10.77□□□□□ -0.68
CECR3-201ENST00000428828 IQCMA0A1B0GVH7 501 aa10.77□□□□□ -0.69
CECR3-201ENST00000428828 SLC16A5O15375 505 aa10.77□□□□□ -0.69
CECR3-201ENST00000428828 SLC22A3O75751 556 aa10.77□□□□□ -0.69
CECR3-201ENST00000428828 ATP6AP2O75787 350 aa10.77□□□□□ -0.69
CECR3-201ENST00000428828 IFNA7P01567 189 aa10.77□□□□□ -0.69
CECR3-201ENST00000428828 GIMD1P0DJR0 217 aa10.77□□□□□ -0.69
CECR3-201ENST00000428828 HGFP14210 728 aa10.77□□□□□ -0.69
CECR3-201ENST00000428828 MAGEA2P43356 314 aa10.77□□□□□ -0.69
CECR3-201ENST00000428828 MAPK9P45984 424 aa10.77□□□□□ -0.69
CECR3-201ENST00000428828 PPM1FP49593 454 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms