RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 SLC29A4Q7RTT9 530 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 YTHDF3Q7Z739 585 aaKnown RBP7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 IFNEQ86WN2 208 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 RNF148Q8N7C7 305 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 COX18Q8N8Q8 333 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 OR52N2Q8NGI0 321 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 OR5D16Q8NGK9 328 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 OR1N1Q8NGS0 311 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 SNIP1Q8TAD8 396 aaKnown RBP7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 ZNF721Q8TF20 911 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 SLC9A6Q92581 669 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 TMEM125Q96AQ2 219 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 CCDC124Q96CT7 223 aaKnown RBP7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 SLC7A6OSQ96CW6 309 aaPredicted RBP7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 VMP1Q96GC9 406 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 IP6K3Q96PC2 410 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 CDRT15Q96T59 188 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 ECSITQ9BQ95 431 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 WDR77Q9BQA1 342 aaPredicted RBP7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 BTBD10Q9BSF8 475 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 THTPAQ9BU02 230 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 NUDT9Q9BW91 350 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 ACTRT3Q9BYD9 372 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 OR10A5Q9H207 317 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 C1orf21Q9H246 121 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 PIF1Q9H611 641 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 EPS8L2Q9H6S3 715 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 FOLH1BQ9HBA9 442 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 GPATCH2Q9NW75 528 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 CMTM6Q9NX76 183 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 NTMQ9P121 344 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 PRODH2Q9UF12 536 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 ZNF639Q9UID6 485 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 PACSIN3Q9UKS6 424 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 PRPF19Q9UMS4 504 aaKnown RBP7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 AP3M1Q9Y2T2 418 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 HEMK1Q9Y5R4 338 aaPredicted RBP7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 SPTBP11277 2137 aa7.36□□□□□ -1.23
HMGA1P4-201ENST00000428643 SPEGQ15772 3267 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 SCN3AQ9NY46 2000 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 A0A1W2PQ72 361 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 TMEM247A6NEH6 219 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 OR6C76A6NM76 312 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 ZNF891A8MT65 544 aaPredicted RBP7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 NME4O00746 187 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 TLX3O43711 291 aaPredicted RBP7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 DNAJA2O60884 412 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 DNAJC8O75937 253 aaPredicted RBP7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 PSMG1O95456 288 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 CLPSP04118 112 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 CELA2AP08217 269 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 ACP2P11117 423 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 S1PR1P21453 382 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 MATN1P21941 496 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 SOX18P35713 384 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 SOX11P35716 441 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 GSK3BP49841 420 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 EMDP50402 254 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 CLCN2P51788 898 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 CORO7P57737 925 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 FADDQ13158 208 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 RGNQ15493 299 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 ATAD3BQ5T9A4 648 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 ATP1A1-AS1Q5TC04 95 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 PLAG1Q6DJT9 500 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 C16orf62Q7Z3J2 963 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 SLC44A2Q8IWA5 706 aaPredicted RBP7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 C9orf40Q8IXQ3 194 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 SLC15A3Q8IY34 581 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 ARHGAP24Q8N264 748 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 HORMAD2Q8N7B1 307 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 ZNF615Q8N8J6 731 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 CDRT4Q8N9R6 151 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 NFAM1Q8NET5 270 aaPredicted RBP7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 OR2T12Q8NG77 320 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 OR10A6Q8NH74 314 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 C16orf52Q8NHV5 167 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 GPR151Q8TDV0 419 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 ADAMTS15Q8TE58 950 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 CDS1Q92903 461 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 RAB8BQ92930 207 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 NACC2Q96BF6 587 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 GIMAP5Q96F15 307 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 C16orf58Q96GQ5 468 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 CLPTM1LQ96KA5 538 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 VSTM2LQ96N03 204 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 DCBLD2Q96PD2 775 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 OR7D2Q96RA2 312 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 KCTD14Q9BQ13 255 aaPredicted RBP7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 ITPAQ9BY32 194 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 OR51I1Q9H343 314 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 SERHL2Q9H4I8 314 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 ALG2Q9H553 416 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 KAT8Q9H7Z6 458 aaKnown RBP7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 TMEM181Q9P2C4 612 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 ABCD2Q9UBJ2 740 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 PPIEQ9UNP9 301 aaKnown RBP7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 CFL2Q9Y281 166 aa7.35□□□□□ -1.23
HMGA1P4-201ENST00000428643 DTX4Q9Y2E6 619 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms