RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 MRGPRGQ86SM5 289 aa8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 TICAM1Q8IUC6 712 aa8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 SAMD14Q8IZD0 417 aaPredicted RBP8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 FAM109AQ8N4B1 249 aa8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 TMEM251Q8N6I4 163 aa8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 SIMC1Q8NDZ2 872 aa8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 AGR3Q8TD06 166 aa8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 TCP10LQ8TDR4 215 aa8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 ITLN2Q8WWU7 325 aaPredicted RBP8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 DIO2Q92813 273 aa8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 KAT2AQ92830 837 aa8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 ADIPOR1Q96A54 375 aa8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 C11orf24Q96F05 449 aaPredicted RBP8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 BBS4Q96RK4 519 aa8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 DOHHQ9BU89 302 aa8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 NXF5Q9H1B4 397 aaKnown RBP8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 ZDHHC11Q9H8X9 412 aa8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 ANKRA2Q9H9E1 313 aa8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 IL1RL2Q9HB29 575 aa8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 LRTM1Q9HBL6 345 aa8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 MYNNQ9NPC7 610 aa8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 MIEF1Q9NQG6 463 aa8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 SLC35C2Q9NQQ7 365 aa8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 EHD3Q9NZN3 535 aa8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 CNOT11Q9UKZ1 510 aaKnown RBP8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 BOKQ9UMX3 212 aaPredicted RBP8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 MEMO1Q9Y316 297 aa8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 CHCHD2Q9Y6H1 151 aaPredicted RBP8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.48□□□□□ -1.05
RFX3-AS1-202ENST00000427722 SERTM1A2A2V5 107 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 CAPN14A8MX76 684 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 PRSS44E7EML9 344 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 SLC28A1O00337 649 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 TP53I11O14683 189 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 RGS16O15492 202 aaPredicted RBP8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 RGS14O43566 566 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 SEC22BO75396 215 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 NME6O75414 186 aaPredicted RBP8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 NEFHP12036 1026 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 DDCP20711 480 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 ABCD3P28288 659 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 NTSP30990 170 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 DCTP40126 519 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 GSTM5P46439 218 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 MASP1P48740 699 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 RPL38P63173 70 aaKnown RBP8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 ADORA2A-AS1P86434 159 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 C2orf80Q0P641 193 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 PLCXD2Q0VAA5 305 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 MAP4K2Q12851 820 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 ZNF155Q12901 538 aaPredicted RBP8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 NTRK2Q16620 822 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 ZNF628Q5EBL2 1059 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 ARL13AQ5H913 290 aaPredicted RBP8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 SH2D4BQ5SQS7 431 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 FAM71E1Q6IPT2 247 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 NOXRED1Q6NXP6 359 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 DOLPP1Q86YN1 238 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 DDIASQ8IXT1 998 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 FAM9CQ8IZT9 166 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 ZNF808Q8N4W9 903 aaPredicted RBP8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 C17orf47Q8NEP4 570 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 OR2T11Q8NH01 316 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 FAM57AQ8TBR7 257 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 SPPL2AQ8TCT8 520 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 ZNF675Q8TD23 568 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 TWIST2Q8WVJ9 160 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 GFM2Q969S9 779 aaKnown RBP8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 TP53INP1Q96A56 240 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 CTHRC1Q96CG8 243 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 PKNOX2Q96KN3 472 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 ZNF597Q96LX8 424 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 RILPQ96NA2 401 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 TMEM109Q9BVC6 243 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 CENPHQ9H3R5 247 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 TUBB1Q9H4B7 451 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 ZNF703Q9H7S9 590 aaPredicted RBP8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 C1orf109Q9NX04 203 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 SIRT5Q9NXA8 310 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 CNIH4Q9P003 139 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 B4GALT7Q9UBV7 327 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 PRODH2Q9UF12 536 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 ZNF639Q9UID6 485 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 RAB21Q9UL25 225 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 CFL2Q9Y281 166 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 NPFFR2Q9Y5X5 522 aa8.47□□□□□ -1.05
RFX3-AS1-202ENST00000427722 ICE1Q9Y2F5 2266 aa8.46□□□□□ -1.05
RFX3-AS1-202ENST00000427722 FRG2CA6NGY1 282 aa8.46□□□□□ -1.06
RFX3-AS1-202ENST00000427722 NPIPA2E9PIF3 369 aa8.46□□□□□ -1.06
RFX3-AS1-202ENST00000427722 NPIPA3F8WFD2 350 aa8.46□□□□□ -1.06
RFX3-AS1-202ENST00000427722 PIP5K1BO14986 540 aa8.46□□□□□ -1.06
RFX3-AS1-202ENST00000427722 TYROBPO43914 113 aa8.46□□□□□ -1.06
RFX3-AS1-202ENST00000427722 NPHS1O60500 1241 aa8.46□□□□□ -1.06
RFX3-AS1-202ENST00000427722 PPM1BO75688 479 aa8.46□□□□□ -1.06
RFX3-AS1-202ENST00000427722 IL2RAP01589 272 aa8.46□□□□□ -1.06
RFX3-AS1-202ENST00000427722 JUNP05412 331 aaKnown RBP8.46□□□□□ -1.06
RFX3-AS1-202ENST00000427722 RFPL3SP0C7P2 107 aa8.46□□□□□ -1.06
RFX3-AS1-202ENST00000427722 LINC00032P0C843 101 aa8.46□□□□□ -1.06
RFX3-AS1-202ENST00000427722 TACR1P25103 407 aa8.46□□□□□ -1.06
RFX3-AS1-202ENST00000427722 SOX18P35713 384 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms