RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 DGKQP52824 942 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 FOXA1P55317 472 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 DNAJB13P59910 316 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 FUT7Q11130 342 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 HEPACAMQ14CZ8 416 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 LIPMQ5VYY2 423 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 FAM180BQ6P0A1 224 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 LYPD8Q6UX82 237 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 SH2D5Q6ZV89 423 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 CHERPQ8IWX8 916 aaKnown RBP11.69□□□□□ -0.54
SGCE-203ENST00000425444 LRRC25Q8N386 305 aaPredicted RBP11.69□□□□□ -0.54
SGCE-203ENST00000425444 FBXW8Q8N3Y1 598 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 RIBC1Q8N443 379 aaPredicted RBP11.69□□□□□ -0.54
SGCE-203ENST00000425444 TMEM251Q8N6I4 163 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 ZNF615Q8N8J6 731 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 OR10G3Q8NGC4 313 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 FAM57AQ8TBR7 257 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 PAQR8Q8TEZ7 354 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 APIPQ96GX9 242 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 JSRP1Q96MG2 331 aaPredicted RBP11.69□□□□□ -0.54
SGCE-203ENST00000425444 SHCBP1LQ9BZQ2 653 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 EXO5Q9H790 373 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 RYDENQ9NUL5 291 aaKnown RBP11.69□□□□□ -0.54
SGCE-203ENST00000425444 GIMAP4Q9NUV9 329 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 OXSMQ9NWU1 459 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 TUBA8Q9NY65 449 aaPredicted RBP11.69□□□□□ -0.54
SGCE-203ENST00000425444 DLGAP4Q9Y2H0 992 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.69□□□□□ -0.54
SGCE-203ENST00000425444 DNAJC13O75165 2243 aa11.69□□□□□ -0.54
SGCE-203ENST00000425444 SONP18583 2426 aaKnown RBP11.68□□□□□ -0.54
SGCE-203ENST00000425444 ATP6AP2A0A1C7CYW4 349 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 NPIPA2E9PIF3 369 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 NPIPA3F8WFD2 350 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 UBFD1O14562 309 aaKnown RBP11.68□□□□□ -0.54
SGCE-203ENST00000425444 ADAM10O14672 748 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 TP53I11O14683 189 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 ATP6AP2O75787 350 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 GLSO94925 669 aaPredicted RBP11.68□□□□□ -0.54
SGCE-203ENST00000425444 SLU7O95391 586 aaKnown RBP11.68□□□□□ -0.54
SGCE-203ENST00000425444 ATP1B1P05026 303 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 HOXD4P09016 255 aaPredicted RBP11.68□□□□□ -0.54
SGCE-203ENST00000425444 ANXA4P09525 319 aaPredicted RBP11.68□□□□□ -0.54
SGCE-203ENST00000425444 NUDT17P0C025 328 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 MSX1P28360 303 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 RPP38P78345 283 aaKnown RBP11.68□□□□□ -0.54
SGCE-203ENST00000425444 RAE1P78406 368 aaKnown RBP11.68□□□□□ -0.54
SGCE-203ENST00000425444 TFF3Q07654 80 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 EXOSC7Q15024 291 aaKnown RBP11.68□□□□□ -0.54
SGCE-203ENST00000425444 RPS6KA2Q15349 733 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 LTB4RQ15722 352 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 NNATQ16517 81 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 NTRK2Q16620 822 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 PRICKLE4Q2TBC4 344 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 FAM111BQ6SJ93 734 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 TMEM64Q6YI46 380 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 PRR22Q8IZ63 422 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 ZNF441Q8N8Z8 693 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 WFDC11Q8NEX6 87 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 ADCY4Q8NFM4 1077 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 C16orf78Q8WTQ4 265 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 DIO2Q92813 273 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 TP53INP1Q96A56 240 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 EXOSC8Q96B26 276 aaKnown RBP11.68□□□□□ -0.54
SGCE-203ENST00000425444 CNRIP1Q96F85 164 aaPredicted RBP11.68□□□□□ -0.54
SGCE-203ENST00000425444 APOPT1Q96IL0 206 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 SMC6Q96SB8 1091 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 DOHHQ9BU89 302 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 ITPAQ9BY32 194 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 POLDIP3Q9BY77 421 aaKnown RBP11.68□□□□□ -0.54
SGCE-203ENST00000425444 UCK2Q9BZX2 261 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 LDAHQ9H6V9 325 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 ZDHHC11Q9H8X9 412 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 SH2D2AQ9NP31 389 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 KCNJ16Q9NPI9 418 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 MAT2BQ9NZL9 334 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 CNIH4Q9P003 139 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 SENP1Q9P0U3 644 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 HEY2Q9UBP5 337 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 B4GALT7Q9UBV7 327 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.68□□□□□ -0.54
SGCE-203ENST00000425444 EDARQ9UNE0 448 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 NPFFR2Q9Y5X5 522 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 LIPGQ9Y5X9 500 aa11.68□□□□□ -0.54
SGCE-203ENST00000425444 V9GYY5 206 aaPredicted RBP11.68□□□□□ -0.54
SGCE-203ENST00000425444 HEXAP06865 529 aa11.67□□□□□ -0.54
SGCE-203ENST00000425444 UROSP10746 265 aa11.67□□□□□ -0.54
SGCE-203ENST00000425444 GPX3P22352 226 aa11.67□□□□□ -0.54
SGCE-203ENST00000425444 PCSK6P29122 969 aa11.67□□□□□ -0.54
SGCE-203ENST00000425444 FBXW4P57775 412 aa11.67□□□□□ -0.54
SGCE-203ENST00000425444 DUSP2Q05923 314 aa11.67□□□□□ -0.54
SGCE-203ENST00000425444 SLC18A2Q05940 514 aa11.67□□□□□ -0.54
SGCE-203ENST00000425444 ZNF763Q0D2J5 394 aa11.67□□□□□ -0.54
SGCE-203ENST00000425444 PLCXD2Q0VAA5 305 aa11.67□□□□□ -0.54
SGCE-203ENST00000425444 FOXO1Q12778 655 aa11.67□□□□□ -0.54
SGCE-203ENST00000425444 MAP4K2Q12851 820 aa11.67□□□□□ -0.54
SGCE-203ENST00000425444 TBCELQ5QJ74 424 aa11.67□□□□□ -0.54
SGCE-203ENST00000425444 EMBQ6PCB8 327 aa11.67□□□□□ -0.54
SGCE-203ENST00000425444 C10orf107Q8IVU9 208 aa11.67□□□□□ -0.54
SGCE-203ENST00000425444 CCDC116Q8IYX3 515 aa11.67□□□□□ -0.54
SGCE-203ENST00000425444 SAMD14Q8IZD0 417 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms