RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 SPPL2CQ8IUH8 684 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 EID3Q8N140 333 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 OR10G3Q8NGC4 313 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 OR6Y1Q8NGX8 325 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 ZFP28Q8NHY6 868 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.08□□□□□ -0.8
USP49-204ENST00000423567 DIO2Q92813 273 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 KAT2AQ92830 837 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 GFM2Q969S9 779 aaKnown RBP10.08□□□□□ -0.8
USP49-204ENST00000423567 PPCDCQ96CD2 204 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 TSSK3Q96PN8 268 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 SECISBP2Q96T21 854 aaKnown RBP10.08□□□□□ -0.8
USP49-204ENST00000423567 DOHHQ9BU89 302 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 ITPAQ9BY32 194 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 TTTY12Q9BZ98 90 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 REEP4Q9H6H4 257 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 IL1RL2Q9HB29 575 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 ARGLU1Q9NWB6 273 aaPredicted RBP10.08□□□□□ -0.8
USP49-204ENST00000423567 TAS2R9Q9NYW1 312 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 SH3BP4Q9P0V3 963 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 B4GALT7Q9UBV7 327 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 ZNF639Q9UID6 485 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 ZDHHC2Q9UIJ5 367 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 SH3BGRL2Q9UJC5 107 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 BOKQ9UMX3 212 aaPredicted RBP10.08□□□□□ -0.8
USP49-204ENST00000423567 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.08□□□□□ -0.8
USP49-204ENST00000423567 RAP2CQ9Y3L5 183 aa10.08□□□□□ -0.8
USP49-204ENST00000423567 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.08□□□□□ -0.8
USP49-204ENST00000423567 PRRC2CQ9Y520 2896 aaKnown RBP10.07□□□□□ -0.8
USP49-204ENST00000423567 TMEM120BA0PK00 339 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 FRG2CA6NGY1 282 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 FAM166BA8MTA8 275 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 CCL21O00585 134 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 PRRG2O14669 202 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 PDPK1O15530 556 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 AKAP10O43572 662 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 PLOD3O60568 738 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 LYPLA1O75608 230 aaPredicted RBP10.07□□□□□ -0.8
USP49-204ENST00000423567 PPM1BO75688 479 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 LRATO95237 230 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 LDLRP01130 860 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 DHRS4L1P0CG22 281 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 ESRRAP11474 423 aaPredicted RBP10.07□□□□□ -0.8
USP49-204ENST00000423567 SDC1P18827 310 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 BGNP21810 368 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 DRD5P21918 477 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 TACR1P25103 407 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 ABCD3P28288 659 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 GPC1P35052 558 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 KRT20P35900 424 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 HPCAL1P37235 193 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 PIGAP37287 484 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 CA7P43166 264 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 PPICP45877 212 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 SLC1A6P48664 564 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 RPL14P50914 215 aaKnown RBP10.07□□□□□ -0.8
USP49-204ENST00000423567 FBXW4P57775 412 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 MAGOHP61326 146 aaKnown RBP10.07□□□□□ -0.8
USP49-204ENST00000423567 STX3Q13277 289 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 CASP8Q14790 479 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 NNATQ16517 81 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 XKR7Q5GH72 579 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 PRAMEF20Q5VT98 475 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 TMEM198Q66K66 360 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 ARHGAP11AQ6P4F7 1023 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 TMEM64Q6YI46 380 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 FAM109AQ8N4B1 249 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 FNDC5Q8NAU1 212 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 CLHC1Q8NHS4 586 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 RELTQ969Z4 430 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 TUBGCP3Q96CW5 907 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 MTERF3Q96E29 417 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 ZBED6CLQ96FA7 236 aaPredicted RBP10.07□□□□□ -0.8
USP49-204ENST00000423567 ZNF764Q96H86 408 aaPredicted RBP10.07□□□□□ -0.8
USP49-204ENST00000423567 EGLN2Q96KS0 407 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 FCRL1Q96LA6 429 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 JSRP1Q96MG2 331 aaPredicted RBP10.07□□□□□ -0.8
USP49-204ENST00000423567 NXF5Q9H1B4 397 aaKnown RBP10.07□□□□□ -0.8
USP49-204ENST00000423567 DEFB127Q9H1M4 99 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 GLIPR2Q9H4G4 154 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 TMBIM4Q9HC24 238 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 SH2D2AQ9NP31 389 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 DDX18Q9NVP1 670 aaKnown RBP10.07□□□□□ -0.8
USP49-204ENST00000423567 TUBA8Q9NY65 449 aaPredicted RBP10.07□□□□□ -0.8
USP49-204ENST00000423567 EIF3LQ9Y262 564 aaKnown RBP10.07□□□□□ -0.8
USP49-204ENST00000423567 DTX4Q9Y2E6 619 aa10.07□□□□□ -0.8
USP49-204ENST00000423567 CHCHD2Q9Y6H1 151 aaPredicted RBP10.07□□□□□ -0.8
USP49-204ENST00000423567 A0A087WV62 115 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 A0A0G2JMM0 328 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 ATP6AP2A0A1C7CYW4 349 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 A0A1W2PPB8 328 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 A0A1W2PRS3 328 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 PINLYPA6NC86 204 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 ANKRD33BA6NCL7 494 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 KIR3DP1A8MWS1 328 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 ITM2AO43736 263 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 TBX19O60806 448 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 ERN1O75460 977 aaKnown RBP10.06□□□□□ -0.8
USP49-204ENST00000423567 ATP6AP2O75787 350 aa10.06□□□□□ -0.8
USP49-204ENST00000423567 SNX4O95219 450 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms