RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 EXOSC6Q5RKV6 272 aaKnown RBP19.41■□□□□ 0.7
CASC3-203ENST00000418132 SLC44A2Q8IWA5 706 aaPredicted RBP19.41■□□□□ 0.7
CASC3-203ENST00000418132 DOK4Q8TEW6 326 aa19.41■□□□□ 0.7
CASC3-203ENST00000418132 RIT1Q92963 219 aa19.41■□□□□ 0.7
CASC3-203ENST00000418132 TAMM41Q96BW9 452 aa19.41■□□□□ 0.7
CASC3-203ENST00000418132 PTCHD1Q96NR3 888 aa19.41■□□□□ 0.7
CASC3-203ENST00000418132 ADAP2Q9NPF8 381 aa19.41■□□□□ 0.7
CASC3-203ENST00000418132 SCOCQ9UIL1 159 aa19.41■□□□□ 0.7
CASC3-203ENST00000418132 DPPA5A6NC42 116 aa19.4■□□□□ 0.7
CASC3-203ENST00000418132 SUV39H1O43463 412 aa19.4■□□□□ 0.7
CASC3-203ENST00000418132 CBX7O95931 251 aa19.4■□□□□ 0.7
CASC3-203ENST00000418132 IFNA14P01570 189 aa19.4■□□□□ 0.7
CASC3-203ENST00000418132 ATXN8OSP0DMR3 200 aa19.4■□□□□ 0.7
CASC3-203ENST00000418132 RORAP35398 523 aa19.4■□□□□ 0.7
CASC3-203ENST00000418132 MAGEA2P43356 314 aa19.4■□□□□ 0.7
CASC3-203ENST00000418132 SELENOWP63302 87 aa19.4■□□□□ 0.7
CASC3-203ENST00000418132 MC2RQ01718 297 aa19.4■□□□□ 0.7
CASC3-203ENST00000418132 FUT5Q11128 374 aa19.4■□□□□ 0.7
CASC3-203ENST00000418132 ATP6AP1Q15904 470 aa19.4■□□□□ 0.7
CASC3-203ENST00000418132 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.4■□□□□ 0.7
CASC3-203ENST00000418132 VWA2Q5GFL6 755 aa19.4■□□□□ 0.7
CASC3-203ENST00000418132 ZNF385CQ66K41 422 aaPredicted RBP19.4■□□□□ 0.7
CASC3-203ENST00000418132 ZCCHC12Q6PEW1 402 aa19.4■□□□□ 0.7
CASC3-203ENST00000418132 SLC16A11Q8NCK7 471 aa19.4■□□□□ 0.7
CASC3-203ENST00000418132 C7orf57Q8NEG2 295 aa19.4■□□□□ 0.7
CASC3-203ENST00000418132 CLIP3Q96DZ5 547 aa19.4■□□□□ 0.7
CASC3-203ENST00000418132 CENPNQ96H22 339 aaPredicted RBP19.4■□□□□ 0.7
CASC3-203ENST00000418132 HSH2DQ96JZ2 352 aa19.4■□□□□ 0.7
CASC3-203ENST00000418132 VCXQ9H320 206 aa19.4■□□□□ 0.7
CASC3-203ENST00000418132 FBXO8Q9NRD0 319 aa19.4■□□□□ 0.7
CASC3-203ENST00000418132 KCNE3Q9Y6H6 103 aa19.4■□□□□ 0.7
CASC3-203ENST00000418132 IGLV3-12A0A075B6K2 115 aa19.39■□□□□ 0.7
CASC3-203ENST00000418132 POLR1CO15160 346 aaPredicted RBP19.39■□□□□ 0.7
CASC3-203ENST00000418132 SLC28A2O43868 658 aa19.39■□□□□ 0.7
CASC3-203ENST00000418132 NME6O75414 186 aaPredicted RBP19.39■□□□□ 0.7
CASC3-203ENST00000418132 NR2F1P10589 423 aa19.39■□□□□ 0.7
CASC3-203ENST00000418132 NBL1P41271 181 aa19.39■□□□□ 0.7
CASC3-203ENST00000418132 E2F1Q01094 437 aa19.39■□□□□ 0.7
CASC3-203ENST00000418132 RHAGQ02094 409 aa19.39■□□□□ 0.7
CASC3-203ENST00000418132 GNA13Q14344 377 aa19.39■□□□□ 0.7
CASC3-203ENST00000418132 EXOSC7Q15024 291 aaKnown RBP19.39■□□□□ 0.7
CASC3-203ENST00000418132 NKAIN1Q4KMZ8 207 aa19.39■□□□□ 0.7
CASC3-203ENST00000418132 RPS26P11Q5JNZ5 115 aaPredicted RBP19.39■□□□□ 0.7
CASC3-203ENST00000418132 VTCN1Q7Z7D3 282 aa19.39■□□□□ 0.7
CASC3-203ENST00000418132 GALNT4Q8N4A0 578 aa19.39■□□□□ 0.7
CASC3-203ENST00000418132 ANKFN1Q8N957 763 aa19.39■□□□□ 0.7
CASC3-203ENST00000418132 ADAMTS15Q8TE58 950 aa19.39■□□□□ 0.7
CASC3-203ENST00000418132 EME1Q96AY2 570 aa19.39■□□□□ 0.7
CASC3-203ENST00000418132 SLC35A4Q96G79 324 aa19.39■□□□□ 0.7
CASC3-203ENST00000418132 TREX2Q9BQ50 279 aaPredicted RBP19.39■□□□□ 0.7
CASC3-203ENST00000418132 DOHHQ9BU89 302 aa19.39■□□□□ 0.7
CASC3-203ENST00000418132 TGIF2Q9GZN2 237 aa19.39■□□□□ 0.7
CASC3-203ENST00000418132 BCL2L10Q9HD36 194 aa19.39■□□□□ 0.7
CASC3-203ENST00000418132 LIPT1Q9Y234 373 aa19.39■□□□□ 0.7
CASC3-203ENST00000418132 FAM149AA5PLN7 773 aa19.39■□□□□ 0.69
CASC3-203ENST00000418132 PDE9AO76083 593 aa19.39■□□□□ 0.69
CASC3-203ENST00000418132 AGR2O95994 175 aa19.39■□□□□ 0.69
CASC3-203ENST00000418132 OPN1SWP03999 348 aa19.39■□□□□ 0.69
CASC3-203ENST00000418132 CCL4P13236 92 aa19.39■□□□□ 0.69
CASC3-203ENST00000418132 MAP3K8P41279 467 aa19.39■□□□□ 0.69
CASC3-203ENST00000418132 CRISP3P54108 245 aa19.39■□□□□ 0.69
CASC3-203ENST00000418132 MINDY4Q4G0A6 757 aa19.39■□□□□ 0.69
CASC3-203ENST00000418132 PRAMEF8Q5VWM4 474 aa19.39■□□□□ 0.69
CASC3-203ENST00000418132 PRAMEF7Q5VXH5 474 aa19.39■□□□□ 0.69
CASC3-203ENST00000418132 CDRT4Q8N9R6 151 aa19.39■□□□□ 0.69
CASC3-203ENST00000418132 ZNF578Q96N58 590 aaPredicted RBP19.39■□□□□ 0.69
CASC3-203ENST00000418132 CXorf56Q9H5V9 222 aa19.39■□□□□ 0.69
CASC3-203ENST00000418132 IL1RAPQ9NPH3 570 aa19.39■□□□□ 0.69
CASC3-203ENST00000418132 CLOCKO15516 846 aa19.38■□□□□ 0.69
CASC3-203ENST00000418132 GDF9O60383 454 aa19.38■□□□□ 0.69
CASC3-203ENST00000418132 COQ9O75208 318 aa19.38■□□□□ 0.69
CASC3-203ENST00000418132 RFPL3O75679 317 aa19.38■□□□□ 0.69
CASC3-203ENST00000418132 LDLRP01130 860 aa19.38■□□□□ 0.69
CASC3-203ENST00000418132 ACP2P11117 423 aa19.38■□□□□ 0.69
CASC3-203ENST00000418132 ZNF26P17031 533 aaPredicted RBP19.38■□□□□ 0.69
CASC3-203ENST00000418132 EFNA3P52797 238 aa19.38■□□□□ 0.69
CASC3-203ENST00000418132 DCDP81605 110 aaKnown RBP19.38■□□□□ 0.69
CASC3-203ENST00000418132 DUSP8Q13202 625 aa19.38■□□□□ 0.69
CASC3-203ENST00000418132 HEPHL1Q6MZM0 1159 aa19.38■□□□□ 0.69
CASC3-203ENST00000418132 WDR53Q7Z5U6 358 aaPredicted RBP19.38■□□□□ 0.69
CASC3-203ENST00000418132 HOXB13Q92826 284 aaPredicted RBP19.38■□□□□ 0.69
CASC3-203ENST00000418132 RNF31Q96EP0 1072 aa19.38■□□□□ 0.69
CASC3-203ENST00000418132 TPD52L3Q96J77 140 aa19.38■□□□□ 0.69
CASC3-203ENST00000418132 CTRCQ99895 268 aa19.38■□□□□ 0.69
CASC3-203ENST00000418132 RUBCNLQ9H714 662 aa19.38■□□□□ 0.69
CASC3-203ENST00000418132 GIN1Q9NXP7 522 aa19.38■□□□□ 0.69
CASC3-203ENST00000418132 CTSFQ9UBX1 484 aa19.38■□□□□ 0.69
CASC3-203ENST00000418132 CNOT11Q9UKZ1 510 aaKnown RBP19.38■□□□□ 0.69
CASC3-203ENST00000418132 DENRO43583 198 aaKnown RBP19.37■□□□□ 0.69
CASC3-203ENST00000418132 DEAF1O75398 565 aaPredicted RBP19.37■□□□□ 0.69
CASC3-203ENST00000418132 PRSS23O95084 383 aa19.37■□□□□ 0.69
CASC3-203ENST00000418132 CHRM4P08173 479 aa19.37■□□□□ 0.69
CASC3-203ENST00000418132 KCNJ10P78508 379 aa19.37■□□□□ 0.69
CASC3-203ENST00000418132 INSM1Q01101 510 aaPredicted RBP19.37■□□□□ 0.69
CASC3-203ENST00000418132 ATAD3BQ5T9A4 648 aa19.37■□□□□ 0.69
CASC3-203ENST00000418132 MFSD4BQ5TF39 518 aa19.37■□□□□ 0.69
CASC3-203ENST00000418132 FKBP9P1Q75LS8 142 aa19.37■□□□□ 0.69
CASC3-203ENST00000418132 OR52R1Q8NGF1 315 aa19.37■□□□□ 0.69
CASC3-203ENST00000418132 BBS10Q8TAM1 723 aa19.37■□□□□ 0.69
CASC3-203ENST00000418132 LZICQ8WZA0 190 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms