RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 ADAMTS16Q8TE57 1224 aa11.34□□□□□ -0.59
PTPRF-205ENST00000414879 P2RY12Q9H244 342 aa11.34□□□□□ -0.59
PTPRF-205ENST00000414879 UBE2ZQ9H832 354 aaPredicted RBP11.34□□□□□ -0.59
PTPRF-205ENST00000414879 KCNK13Q9HB14 408 aa11.34□□□□□ -0.59
PTPRF-205ENST00000414879 NANSQ9NR45 359 aa11.34□□□□□ -0.59
PTPRF-205ENST00000414879 DCAF13Q9NV06 445 aaKnown RBP11.34□□□□□ -0.59
PTPRF-205ENST00000414879 S1PR1P21453 382 aa11.34□□□□□ -0.59
PTPRF-205ENST00000414879 CLDN2P57739 230 aa11.34□□□□□ -0.59
PTPRF-205ENST00000414879 ADAM8P78325 824 aa11.34□□□□□ -0.59
PTPRF-205ENST00000414879 HSF2Q03933 536 aa11.34□□□□□ -0.59
PTPRF-205ENST00000414879 RSPO2Q6UXX9 243 aaPredicted RBP11.34□□□□□ -0.59
PTPRF-205ENST00000414879 AGBL5Q8NDL9 886 aa11.34□□□□□ -0.59
PTPRF-205ENST00000414879 ASB15Q8WXK1 588 aa11.34□□□□□ -0.59
PTPRF-205ENST00000414879 CRB3Q9BUF7 120 aa11.34□□□□□ -0.59
PTPRF-205ENST00000414879 BTBD2Q9BX70 525 aa11.34□□□□□ -0.59
PTPRF-205ENST00000414879 SEC61A2Q9H9S3 476 aa11.34□□□□□ -0.59
PTPRF-205ENST00000414879 ZNF304Q9HCX3 659 aa11.34□□□□□ -0.59
PTPRF-205ENST00000414879 LRIT1Q9P2V4 623 aa11.34□□□□□ -0.59
PTPRF-205ENST00000414879 MMACHCQ9Y4U1 282 aa11.34□□□□□ -0.59
PTPRF-205ENST00000414879 PTGDR2Q9Y5Y4 395 aa11.34□□□□□ -0.59
PTPRF-205ENST00000414879 FKBP7Q9Y680 259 aa11.34□□□□□ -0.59
PTPRF-205ENST00000414879 C2orf92A0A1B0GVN3 265 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 OSMP13725 252 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 HLCSP50747 726 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 ARHGDIBP52566 201 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 OTUD1Q5VV17 481 aaPredicted RBP11.33□□□□□ -0.6
PTPRF-205ENST00000414879 ZNF551Q7Z340 670 aaPredicted RBP11.33□□□□□ -0.6
PTPRF-205ENST00000414879 ALDH16A1Q8IZ83 802 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 CLECL1Q8IZS7 167 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 MS4A15Q8N5U1 240 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 MFSD2AQ8NA29 543 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 OR14A16Q8NHC5 309 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 SLC6A5Q9Y345 797 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 PIGBOS1A0A0B4J2F0 54 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 A6NIZ1 184 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 IMPA1P29218 277 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 IRS1P35568 1242 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 GMPRP36959 345 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 GCGRP47871 477 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 SGSHP51688 502 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 RAP1BP61224 184 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 RAP1AP62834 184 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 GPLD1P80108 840 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 C18orf21Q32NC0 220 aaPredicted RBP11.33□□□□□ -0.6
PTPRF-205ENST00000414879 ABHD17BQ5VST6 288 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 SLCO4C1Q6ZQN7 724 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 SATL1Q86VE3 508 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 TTYH2Q9BSA4 534 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 IL21Q9HBE4 155 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 POLE3Q9NRF9 147 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 SNTG1Q9NSN8 517 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 HCN2Q9UL51 889 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 RNF6Q9Y252 685 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 CERS1P27544 350 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 TAP2Q03519 686 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 CSTF1Q05048 431 aaKnown RBP11.33□□□□□ -0.6
PTPRF-205ENST00000414879 SFT2D3Q587I9 215 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 PPP1R3BQ86XI6 285 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 ASB12Q8WXK4 309 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 THAP4Q8WY91 577 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 COQ8BQ96D53 544 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 ERMAPQ96PL5 475 aaPredicted RBP11.33□□□□□ -0.6
PTPRF-205ENST00000414879 PKMYT1Q99640 499 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 ZNF696Q9H7X3 374 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 TARM1B6A8C7 271 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 PLOD3O60568 738 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 GABRB3P28472 473 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 OR1E2P47887 323 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 HK3P52790 923 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 TUBB3Q13509 450 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 KEAP1Q14145 624 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 ALG10BQ5I7T1 473 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 IDNKQ5T6J7 187 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 ARL9Q6T311 187 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 LRRN1Q6UXK5 716 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 MISPQ8IVT2 679 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 TM9SF4Q92544 642 aa11.33□□□□□ -0.6
PTPRF-205ENST00000414879 SLC19A2O60779 497 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 RLN1P04808 185 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 FESP07332 822 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 SBSNQ6UWP8 590 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 SH3YL1Q96HL8 342 aaPredicted RBP11.32□□□□□ -0.6
PTPRF-205ENST00000414879 GORASP1Q9BQQ3 440 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 MROQ9BYG7 248 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 MMP27Q9H306 513 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 IDH3BO43837 385 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 DIRAS1O95057 198 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 PDHA2P29803 388 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 MICAQ29983 383 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 NADK2Q4G0N4 442 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 METRNLQ641Q3 311 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 GLT8D1Q68CQ7 371 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 AKAP14Q86UN6 197 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 FTMTQ8N4E7 242 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 C19orf47Q8N9M1 422 aaKnown RBP11.32□□□□□ -0.6
PTPRF-205ENST00000414879 THEM6Q8WUY1 208 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 JPH3Q8WXH2 748 aaPredicted RBP11.32□□□□□ -0.6
PTPRF-205ENST00000414879 EVPLQ92817 2033 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 TBC1D20Q96BZ9 403 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 BIRC8Q96P09 236 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms