RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 SLC26A1Q9H2B4 701 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 TMEM245Q9H330 911 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 MID1IP1Q9NPA3 183 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 GDF3Q9NR23 364 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 SLC7A10Q9NS82 523 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 DDX28Q9NUL7 540 aaKnown RBP2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 CLEC5AQ9NY25 188 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 MRTO4Q9UKD2 239 aaKnown RBP2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 ZNF346Q9UL40 294 aaKnown RBP2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 FBXO7Q9Y3I1 522 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 COL22A1Q8NFW1 1626 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 PIK3R4Q99570 1358 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 TJP1Q07157 1748 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 NUP188Q5SRE5 1749 aa2.96□□□□□ -1.94
HMGB1P11-201ENST00000413899 NPHP4O75161 1426 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 A0A087WWV3 80 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 TEX48A0A1B0GUV7 120 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 TRIM49BA6NDI0 452 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 ZNF840PA6NDX5 716 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 YJEFN3A6XGL0 299 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 MEI4A8MW99 385 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 CHEK1O14757 476 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 PNPP00491 289 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 SFTPBP07988 381 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 OR9G9P0C7N8 305 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 EZRP15311 586 aaKnown RBP2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 SMSP52788 366 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 TSTA3Q13630 321 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 CYLC2Q14093 348 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 TMEM44Q2T9K0 475 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 DCAF12Q5T6F0 453 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 LIPJQ5W064 366 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 SEL1L3Q68CR1 1132 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 LEMD1Q68G75 181 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 REP15Q6BDI9 236 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 ARMCX5Q6P1M9 558 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 GPR142Q7Z601 462 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 CEACAM19Q7Z692 300 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 SERPINA12Q8IW75 414 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 PARP8Q8N3A8 854 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 SUMF1Q8NBK3 374 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 ICA1LQ8NDH6 482 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 CHDHQ8NE62 594 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 ITLN1Q8WWA0 313 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 SLCO4A1Q96BD0 722 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 MRPL53Q96EL3 112 aaKnown RBP2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 EEF2KMTQ96G04 330 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 CABS1Q96KC9 395 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 FAM213AQ9BRX8 229 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 DCLRE1BQ9H816 532 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 Q9HAA7 133 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 ZCCHC3Q9NUD5 404 aaKnown RBP2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 DIMT1Q9UNQ2 313 aaKnown RBP2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 ATG4BQ9Y4P1 393 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 PXDNQ92626 1479 aa2.95□□□□□ -1.94
HMGB1P11-201ENST00000413899 RGS12O14924 1447 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 CICQ96RK0 1608 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 PHF1O43189 567 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 ZNF354AO60765 605 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 DUSP11O75319 330 aaKnown RBP2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 FCER2P06734 321 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 FAM200BP0CF97 657 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 FERP16591 822 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 ARF5P84085 180 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 NPRL3Q12980 569 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 LASP1Q14847 261 aaKnown RBP2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 EMC2Q15006 297 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 HAGHQ16775 308 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 C17orf58Q2M2W7 97 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 EIPR1Q53HC9 387 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 NHLRC3Q5JS37 347 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 SLC10A5Q5PT55 438 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 RNLSQ5VYX0 342 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 ZNF410Q86VK4 478 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 CNTN4Q8IWV2 1026 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 SFRP1Q8N474 314 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 LINC00612Q8N6U2 182 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 ZNF491Q8N8L2 437 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 RTL3Q8N8U3 475 aaKnown RBP2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 OR4A16Q8NH70 328 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 C16orf58Q96GQ5 468 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 CCDC43Q96MW1 224 aaKnown RBP2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 GPR137Q96N19 417 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 PLEKHF1Q96S99 279 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 KCNMB3Q9NPA1 279 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 PRMT8Q9NR22 394 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 ZNF446Q9NWS9 450 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 CWC25Q9NXE8 425 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 CYP39A1Q9NYL5 469 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 MTRRQ9UBK8 725 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 CIDEBQ9UHD4 219 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 KNSTRNQ9Y448 316 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 SNX5Q9Y5X3 404 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 ARFGEF2Q9Y6D5 1785 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 KAT6BQ8WYB5 2073 aa2.94□□□□□ -1.94
HMGB1P11-201ENST00000413899 ITGB4P16144 1822 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 AFDNP55196 1824 aaKnown RBP2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 A0A1B0GUL6 1792 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 ANKRD36CQ5JPF3 1778 aa2.93□□□□□ -1.94
HMGB1P11-201ENST00000413899 MRC1P22897 1456 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms