RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 SERPINB10P48595 397 aa12.76□□□□□ -0.37
LIMS1-205ENST00000410093 GP2P55259 537 aaKnown RBP12.76□□□□□ -0.37
LIMS1-205ENST00000410093 HPCAP84074 193 aa12.76□□□□□ -0.37
LIMS1-205ENST00000410093 LASP1Q14847 261 aaKnown RBP12.76□□□□□ -0.37
LIMS1-205ENST00000410093 PTGES3Q15185 160 aaKnown RBP12.76□□□□□ -0.37
LIMS1-205ENST00000410093 FAM214AQ32MH5 1076 aa12.76□□□□□ -0.37
LIMS1-205ENST00000410093 ZNF829Q3KNS6 432 aaPredicted RBP12.76□□□□□ -0.37
LIMS1-205ENST00000410093 TPRG1LQ5T0D9 272 aa12.76□□□□□ -0.37
LIMS1-205ENST00000410093 C18orf63Q68DL7 685 aa12.76□□□□□ -0.37
LIMS1-205ENST00000410093 HEPHL1Q6MZM0 1159 aa12.76□□□□□ -0.37
LIMS1-205ENST00000410093 CDC73Q6P1J9 531 aa12.76□□□□□ -0.37
LIMS1-205ENST00000410093 KLHL17Q6TDP4 642 aa12.76□□□□□ -0.37
LIMS1-205ENST00000410093 TANKQ92844 425 aa12.76□□□□□ -0.37
LIMS1-205ENST00000410093 YIPF6Q96EC8 236 aa12.76□□□□□ -0.37
LIMS1-205ENST00000410093 C10orf90Q96M02 699 aa12.76□□□□□ -0.37
LIMS1-205ENST00000410093 OR7D2Q96RA2 312 aa12.76□□□□□ -0.37
LIMS1-205ENST00000410093 PHOX2BQ99453 314 aa12.76□□□□□ -0.37
LIMS1-205ENST00000410093 FUZQ9BT04 418 aa12.76□□□□□ -0.37
LIMS1-205ENST00000410093 FNDC11Q9BVV2 318 aa12.76□□□□□ -0.37
LIMS1-205ENST00000410093 UCK1Q9HA47 277 aa12.76□□□□□ -0.37
LIMS1-205ENST00000410093 RASSF1Q9NS23 344 aa12.76□□□□□ -0.37
LIMS1-205ENST00000410093 FTSJ1Q9UET6 329 aa12.76□□□□□ -0.37
LIMS1-205ENST00000410093 PNMA8BQ9ULN7 279 aaPredicted RBP12.76□□□□□ -0.37
LIMS1-205ENST00000410093 A0A1W2PPW3 197 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 SH3PXD2BA1X283 911 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 GFRA3O60609 400 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 AK1P00568 194 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 GASTP01350 101 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 MT-ND2P03891 347 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 ALPPP05187 535 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 EPHA2P29317 976 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 CD6P30203 668 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 CTSKP43235 329 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 MAN2A2P49641 1150 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 PRKAG1P54619 331 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 GANABQ14697 944 aaKnown RBP12.75□□□□□ -0.37
LIMS1-205ENST00000410093 GPAT3Q53EU6 434 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 FGD3Q5JSP0 725 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 SLC25A30Q5SVS4 291 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 MEDAGQ5VYS4 303 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 SLX4IPQ5VYV7 408 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 AP1ARQ63HQ0 302 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 FCRL6Q6DN72 434 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 ARMC6Q6NXE6 501 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 FAM180BQ6P0A1 224 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 TMEM107Q6UX40 140 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 C16orf62Q7Z3J2 963 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 P2RY8Q86VZ1 359 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 FAM20CQ8IXL6 584 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 OR2L13Q8N349 312 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 SDR16C5Q8N3Y7 309 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 KCT2Q8NC54 265 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 OR13H1Q8NG92 308 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 OR9Q2Q8NGE9 314 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 CCL4L1Q8NHW4 92 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 ADAMTS15Q8TE58 950 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 BORCS5Q969J3 196 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 ITPAQ9BY32 194 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 MTHFD2LQ9H903 347 aaPredicted RBP12.75□□□□□ -0.37
LIMS1-205ENST00000410093 LIN28AQ9H9Z2 209 aaKnown RBP12.75□□□□□ -0.37
LIMS1-205ENST00000410093 RLIMQ9NVW2 624 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 WSB2Q9NYS7 404 aaPredicted RBP12.75□□□□□ -0.37
LIMS1-205ENST00000410093 A4GNTQ9UNA3 340 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 ZNF232Q9UNY5 417 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 SNX11Q9Y5W9 270 aa12.75□□□□□ -0.37
LIMS1-205ENST00000410093 A0A1W2PPC4 97 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 PRAMEF27A3QJZ7 478 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 GLOD5A6NK44 160 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 OR10H3O60404 316 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 BCAS1O75363 584 aaPredicted RBP12.74□□□□□ -0.37
LIMS1-205ENST00000410093 CLPXO76031 633 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 INMTO95050 263 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 GUSBP08236 651 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 HOXB3P14651 431 aaPredicted RBP12.74□□□□□ -0.37
LIMS1-205ENST00000410093 PORP16435 677 aaPredicted RBP12.74□□□□□ -0.37
LIMS1-205ENST00000410093 POLR2CP19387 275 aaPredicted RBP12.74□□□□□ -0.37
LIMS1-205ENST00000410093 CHMP24386 653 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 FEN1P39748 380 aaKnown RBP12.74□□□□□ -0.37
LIMS1-205ENST00000410093 NBL1P41271 181 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 IDH2P48735 452 aaKnown RBP12.74□□□□□ -0.37
LIMS1-205ENST00000410093 XKP51811 444 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 TUBA1BP68363 451 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.74□□□□□ -0.372e-6■□□□□ 11.2
LIMS1-205ENST00000410093 GPR19Q15760 415 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 EIPR1Q53HC9 387 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 TMEM201Q5SNT2 666 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 RNLSQ5VYX0 342 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 DEF8Q6ZN54 512 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 SLC16A12Q6ZSM3 486 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 AHSA2Q719I0 299 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 TUBA1AQ71U36 451 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 IQCHQ86VS3 1027 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 PARGQ86W56 976 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 OR5D16Q8NGK9 328 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 ADAMTS18Q8TE60 1221 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 KLHDC7BQ96G42 594 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 TOE1Q96GM8 510 aaKnown RBP12.74□□□□□ -0.37
LIMS1-205ENST00000410093 ARHGDIGQ99819 225 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 DCUN1D5Q9BTE7 237 aa12.74□□□□□ -0.37
LIMS1-205ENST00000410093 CDCA4Q9BXL8 241 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms