RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 FANCMQ8IYD8 2048 aa7.05□□□□□ -1.28
CXCR4-202ENST00000409817 SNRNP200O75643 2136 aaKnown RBP7.05□□□□□ -1.28
CXCR4-202ENST00000409817 C4orf51C9J302 202 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 PGRMC2O15173 223 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 SLC28A2O43868 658 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 PRAMEF10O60809 474 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 B4GALT2O60909 372 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 NOL3O60936 208 aaKnown RBP7.04□□□□□ -1.28
CXCR4-202ENST00000409817 MITFO75030 526 aaPredicted RBP7.04□□□□□ -1.28
CXCR4-202ENST00000409817 CCNB2O95067 398 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 GADD45GO95257 159 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 NR2F1P10589 423 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 ALOX12P18054 663 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 POLR2CP19387 275 aaPredicted RBP7.04□□□□□ -1.28
CXCR4-202ENST00000409817 DCKP27707 260 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 NTF4P34130 210 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 CLK3P49761 638 aaKnown RBP7.04□□□□□ -1.28
CXCR4-202ENST00000409817 MAPK10P53779 464 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 CASP9P55211 416 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 CDH12P55289 794 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 RAB8AP61006 207 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 MVKQ03426 396 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 MEP1AQ16819 746 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 DUSP7Q16829 419 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 CTU2Q2VPK5 515 aaKnown RBP7.04□□□□□ -1.28
CXCR4-202ENST00000409817 MLIPQ5VWP3 458 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 FCRL6Q6DN72 434 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 NIPAL1Q6NVV3 410 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 ARMC6Q6NXE6 501 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 Q6ZS52 159 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 TAF8Q7Z7C8 310 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 GALNT5Q7Z7M9 940 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 LRRC25Q8N386 305 aaPredicted RBP7.04□□□□□ -1.28
CXCR4-202ENST00000409817 SDR16C5Q8N3Y7 309 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 CADM4Q8NFZ8 388 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 PHF10Q8WUB8 498 aaKnown RBP7.04□□□□□ -1.28
CXCR4-202ENST00000409817 NMD3Q96D46 503 aaKnown RBP7.04□□□□□ -1.28
CXCR4-202ENST00000409817 DHRS1Q96LJ7 313 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 ZNF681Q96N22 645 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 NODALQ96S42 347 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 FEVQ99581 238 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 BARD1Q99728 777 aaKnown RBP7.04□□□□□ -1.28
CXCR4-202ENST00000409817 MAPKAP1Q9BPZ7 522 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 TREX2Q9BQ50 279 aaPredicted RBP7.04□□□□□ -1.28
CXCR4-202ENST00000409817 GPR174Q9BXC1 333 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 UCK1Q9HA47 277 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 CXorf21Q9HAI6 301 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 ACER3Q9NUN7 267 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 SEC14L3Q9UDX4 400 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 TMCC3Q9ULS5 477 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 DAPP1Q9UN19 280 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 SLC9A8Q9Y2E8 581 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 SH3GLB1Q9Y371 365 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 CDH23Q9H251 3354 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 OR5K3A6NET4 321 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 SLC22A31A6NKX4 558 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 SYT5O00445 386 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 MPZL2O60487 215 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 NDUFS2O75306 463 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 TRMUO75648 421 aaKnown RBP7.04□□□□□ -1.28
CXCR4-202ENST00000409817 SEC14L2O76054 403 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 SOX30O94993 753 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 ADAP00813 363 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 HMGN2P05204 90 aaKnown RBP7.04□□□□□ -1.28
CXCR4-202ENST00000409817 CELA2BP08218 269 aaPredicted RBP7.04□□□□□ -1.28
CXCR4-202ENST00000409817 ZNF888P0CJ79 500 aaPredicted RBP7.04□□□□□ -1.28
CXCR4-202ENST00000409817 OR12D1P0DN82 309 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 IL7RP16871 459 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 ITIH1P19827 911 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 CD72P21854 359 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 CPN2P22792 545 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 CD27P26842 260 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 OR1E2P47887 323 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 TMBIM6P55061 237 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 SKP1P63208 163 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 RPP38P78345 283 aaKnown RBP7.04□□□□□ -1.28
CXCR4-202ENST00000409817 IL1RL1Q01638 556 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 HHEXQ03014 270 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 RAB39AQ14964 217 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 MAD2L1BPQ15013 274 aaPredicted RBP7.04□□□□□ -1.28
CXCR4-202ENST00000409817 ELOCQ15369 112 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 MAPK11Q15759 364 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 EXOC3L2Q2M3D2 409 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 TMEM31Q5JXX7 168 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 ATAD3BQ5T9A4 648 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 C18orf63Q68DL7 685 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 ANKRD34AQ69YU3 496 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 FAM180BQ6P0A1 224 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 USP53Q70EK8 1073 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 SPARTQ8N0X7 666 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 TAGAPQ8N103 731 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 SVOPQ8N4V2 548 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 SMYD1Q8NB12 490 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 KCT2Q8NC54 265 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 FLCNQ8NFG4 579 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 OR4K14Q8NGD5 310 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 OR13F1Q8NGS4 319 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 OR10G6Q8NH81 332 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 SLC37A2Q8TED4 501 aa7.04□□□□□ -1.28
CXCR4-202ENST00000409817 UBASH3BQ8TF42 649 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms