RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 AAGABQ6PD74 315 aa10.73□□□□□ -0.69
SNX13-202ENST00000409604 ABRAXAS1Q6UWZ7 409 aa10.73□□□□□ -0.69
SNX13-202ENST00000409604 CHERPQ8IWX8 916 aaKnown RBP10.73□□□□□ -0.69
SNX13-202ENST00000409604 SETD9Q8NE22 299 aa10.73□□□□□ -0.69
SNX13-202ENST00000409604 TM4SF18Q96CE8 201 aa10.73□□□□□ -0.69
SNX13-202ENST00000409604 MS4A6EQ96DS6 147 aa10.73□□□□□ -0.69
SNX13-202ENST00000409604 CSF3RQ99062 836 aa10.73□□□□□ -0.69
SNX13-202ENST00000409604 ACTL8Q9H568 366 aa10.73□□□□□ -0.69
SNX13-202ENST00000409604 DNAJB9Q9UBS3 223 aa10.73□□□□□ -0.69
SNX13-202ENST00000409604 PPIL1Q9Y3C6 166 aa10.73□□□□□ -0.69
SNX13-202ENST00000409604 VWA8A3KMH1 1905 aa10.73□□□□□ -0.69
SNX13-202ENST00000409604 ZNF236Q9UL36 1845 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 ARID1AO14497 2285 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 SMIM30A4D0T7 59 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 ARHGAP33O14559 1287 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 UGDHO60701 494 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 SNAP29O95721 258 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 TSPAN19P0C672 248 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 CASRP41180 1078 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 FOLR3P41439 243 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 SLC6A12P48065 614 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 CSNK2BP67870 215 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 TIAL1Q01085 375 aaKnown RBP eCLIP10.72□□□□□ -0.69
SNX13-202ENST00000409604 MERTKQ12866 999 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 C16orf72Q14CZ0 275 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 GAB4Q2WGN9 574 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 NKAIN1Q4KMZ8 207 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 DCAF12Q5T6F0 453 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 PAPD4Q6PIY7 484 aaKnown RBP10.72□□□□□ -0.69
SNX13-202ENST00000409604 C16orf47Q6ZP98 133 aaPredicted RBP10.72□□□□□ -0.69
SNX13-202ENST00000409604 MFSD9Q8NBP5 474 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 PHF21AQ96BD5 680 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 GPATCH1Q9BRR8 931 aaKnown RBP10.72□□□□□ -0.69
SNX13-202ENST00000409604 ADI1Q9BV57 179 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 CDADC1Q9BWV3 514 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 TSPAN10Q9H1Z9 355 aaPredicted RBP10.72□□□□□ -0.69
SNX13-202ENST00000409604 GLIPR2Q9H4G4 154 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 BRF2Q9HAW0 419 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 PADI1Q9ULC6 663 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 ZNF646O15015 1829 aaPredicted RBP10.72□□□□□ -0.69
SNX13-202ENST00000409604 LRRC37A2A6NM11 1700 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 FAM171A2A8MVW0 826 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 CASC3O15234 703 aaKnown RBP10.72□□□□□ -0.69
SNX13-202ENST00000409604 SLC5A2P31639 672 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 INHBCP55103 352 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 SFT2D3Q587I9 215 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 TMEM236Q5W0B7 351 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 C16orf87Q6PH81 154 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 TSPAN14Q8NG11 270 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 GEMIN6Q8WXD5 167 aaKnown RBP10.72□□□□□ -0.69
SNX13-202ENST00000409604 BHLHE41Q9C0J9 482 aaPredicted RBP10.72□□□□□ -0.69
SNX13-202ENST00000409604 NDEL1Q9GZM8 345 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 MRPS7Q9Y2R9 242 aaKnown RBP10.72□□□□□ -0.69
SNX13-202ENST00000409604 J3KTA2 159 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 EIF1AYO14602 144 aaKnown RBP10.72□□□□□ -0.69
SNX13-202ENST00000409604 TLX2O43763 284 aaPredicted RBP10.72□□□□□ -0.69
SNX13-202ENST00000409604 FGF17O60258 216 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 STX11O75558 287 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 ANGPTL1O95841 491 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 SOD1P00441 154 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 GLB1P16278 677 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 RORAP35398 523 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 PLK5Q496M5 336 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 GPR107Q5VW38 600 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 ARMC3Q5W041 872 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 IGFN1Q86VF2 1251 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 SLC22A18ASQ8N1D0 253 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 ZNF527Q8NB42 609 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 OR10H4Q8NGA5 316 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 GPN2Q9H9Y4 310 aaPredicted RBP10.72□□□□□ -0.69
SNX13-202ENST00000409604 ELL3Q9HB65 397 aaPredicted RBP10.72□□□□□ -0.69
SNX13-202ENST00000409604 CENPMQ9NSP4 180 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 TPRKBQ9Y3C4 175 aa10.72□□□□□ -0.69
SNX13-202ENST00000409604 HRO43593 1189 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 SRPX2O60687 465 aaPredicted RBP10.71□□□□□ -0.69
SNX13-202ENST00000409604 CCL4P13236 92 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 FOLR1P15328 257 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 CCNOP22674 350 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 PER3P56645 1201 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 MYBPC1Q00872 1141 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 RUNX1T1Q06455 604 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 CRYZQ08257 329 aaKnown RBP10.71□□□□□ -0.69
SNX13-202ENST00000409604 ZNF385BQ569K4 471 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 CDKL4Q5MAI5 379 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 ATG14Q6ZNE5 492 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 UBE2J2Q8N2K1 259 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 OR9Q2Q8NGE9 314 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 OR4C6Q8NH72 309 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 UTP4Q969X6 686 aaKnown RBP10.71□□□□□ -0.69
SNX13-202ENST00000409604 ISL2Q96A47 359 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 CCDC74BQ96LY2 380 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 FOXN4Q96NZ1 517 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 DOHHQ9BU89 302 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 DNAJC27Q9NZQ0 273 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 CNIH4Q9P003 139 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 PRODH2Q9UF12 536 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 NSG1A0A0A6YYJ2 146 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 MGRN1O60291 552 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 WNT1P04628 370 aa10.71□□□□□ -0.69
SNX13-202ENST00000409604 TPP2P29144 1249 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms