RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 SRSF11Q05519 484 aaKnown RBP10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 ACSM1Q08AH1 577 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 EIF4EBP2Q13542 120 aaPredicted RBP10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 GTF2H2Q13888 395 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 GRM7Q14831 915 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 P2RY14Q15391 338 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 HFEQ30201 348 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 Q3ZCU0 254 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 BCL2L15Q5TBC7 163 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 ZNF57Q68EA5 555 aaPredicted RBP10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 C12orf73Q69YU5 71 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 GTF2H2CQ6P1K8 395 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 GRASPQ7Z6J2 395 aaPredicted RBP10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 MILR1Q7Z6M3 343 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 ZER1Q7Z7L7 766 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 LRRC28Q86X40 367 aaPredicted RBP10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 RNF113BQ8IZP6 322 aaKnown RBP10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 LGI4Q8N135 537 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 FAM71CQ8NEG0 241 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 OR8J1Q8NGP2 316 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 OR52N1Q8NH53 320 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 UBTD2Q8WUN7 234 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 TM9SF4Q92544 642 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 ORAI1Q96D31 301 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 TBATAQ96M53 351 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 CHST8Q9H2A9 424 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 ESRP2Q9H6T0 727 aaKnown RBP10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 FGF20Q9NP95 211 aaPredicted RBP10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 TMEM229AB2RXF0 380 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 PIRO00625 290 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 ABLIM3O94929 683 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 PEX11BO96011 259 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 SOD1P00441 154 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 HIST1H2AGP0C0S8 130 aaPredicted RBP10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 ATXN1LP0C7T5 689 aaKnown RBP10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 EBLN1P0CF75 366 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 HIST1H2ADP20671 130 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 RBMS1P29558 406 aaKnown RBP10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 LRRC74AQ0VAA2 488 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 GSG1Q2KHT4 349 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 CTXN3Q4LDR2 81 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 HIST2H2AA3Q6FI13 130 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 C22orf42Q6IC83 251 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 SUSD1Q6UWL2 747 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 CHMP1BQ7LBR1 199 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 FAM26EQ8N5C1 309 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 OR56B4Q8NH76 319 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 ZNF461Q8TAF7 563 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 HIST1H2AHQ96KK5 128 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 HIST1H2AJQ99878 128 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 NLNQ9BYT8 704 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 SLC39A8Q9C0K1 460 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 TKTL2Q9H0I9 626 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 ABCG5Q9H222 651 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 ASB6Q9NWX5 421 aa10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 FAM120CQ9NX05 1096 aaKnown RBP10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 TESQ9UGI8 421 aaKnown RBP10.06□□□□□ -0.8
NIF3L1-204ENST00000409357 NPEPPSL1A6NEC2 478 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 M0R296 226 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 CACNB4O00305 520 aaPredicted RBP10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 ST8SIA5O15466 376 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 NARSO43776 548 aaKnown RBP10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 HPGDSO60760 199 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 ULK1O75385 1050 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 NFATC1O95644 943 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 RAB36O95755 333 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 ADAP00813 363 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 IGLV3-25P01717 112 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 FABP1P07148 127 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 MMP2P08253 660 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 GIPP09681 153 aaPredicted RBP10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 DRD2P14416 443 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 CXCL3P19876 107 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 S100PP25815 95 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 SSTR4P31391 388 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 NNMTP40261 264 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 RPL35P42766 123 aaKnown RBP10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 PIK3CGP48736 1102 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 WNT4P56705 351 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 RAP2BP61225 183 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 PLIN5Q00G26 463 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 RBBP4Q09028 425 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 GPR17Q13304 367 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 NTRK2Q16620 822 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 IFI44LQ53G44 452 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 CCDC157Q569K6 752 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 SIRPB2Q5JXA9 342 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 PYHIN1Q6K0P9 492 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 UQCC3Q6UW78 93 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 IKBIPQ70UQ0 350 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 C12orf40Q86WS4 652 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 PDZD9Q8IXQ8 264 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 FTMTQ8N4E7 242 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 TTC9BQ8N6N2 239 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 OR5M3Q8NGP4 307 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 OR52P1PQ8NH57 321 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 ELP5Q8TE02 316 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 ING5Q8WYH8 240 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 ST8SIA2Q92186 375 aa10.05□□□□□ -0.8
NIF3L1-204ENST00000409357 MRPS24Q96EL2 167 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms