RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 POLR1EQ9GZS1 481 aaKnown RBP12.1□□□□□ -0.47
HERC3-203ENST00000407637 C20orf85Q9H1P6 137 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 ELAC1Q9H777 363 aaKnown RBP12.1□□□□□ -0.47
HERC3-203ENST00000407637 NMUR1Q9HB89 426 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 MYOZ2Q9NPC6 264 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 SEMA3GQ9NS98 782 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 ZSCAN32Q9NX65 697 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 PIPOXQ9P0Z9 390 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 MGAT4CQ9UBM8 478 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 SEC14L3Q9UDX4 400 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 C1orf226A1L170 272 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 ADAP00813 363 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 ANKRD34CP0C6C1 535 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 SPP1P10451 314 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 UGT2B7P16662 529 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 PRPS1L1P21108 318 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 PGFP49763 221 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 HMGA2P52926 109 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 WDR5P61964 334 aaKnown RBP12.1□□□□□ -0.47
HERC3-203ENST00000407637 SRSF11Q05519 484 aaKnown RBP12.1□□□□□ -0.47
HERC3-203ENST00000407637 ILKQ13418 452 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 HTR4Q13639 388 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 SEC23BQ15437 767 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 CHRNA6Q15825 494 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 OCLNQ16625 522 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 FKBP1CQ5VVH2 108 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 PRAMEF18Q5VWM3 479 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 ALG1LQ6GMV1 187 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 OR5M10Q6IEU7 315 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 ZNF852Q6ZMS4 543 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 UMODL1-AS1Q8N2C9 162 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 CMTM7Q96FZ5 175 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 ZNF251Q9BRH9 671 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 SPATA5L1Q9BVQ7 753 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 EQTNQ9NQ60 294 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 EXOSC3Q9NQT5 275 aaKnown RBP12.1□□□□□ -0.47
HERC3-203ENST00000407637 FAM120CQ9NX05 1096 aaKnown RBP12.1□□□□□ -0.47
HERC3-203ENST00000407637 OARD1Q9Y530 152 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 SLC22A7Q9Y694 548 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 TTLL8A6PVC2 850 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 GPR31O00270 319 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 ARPC5O15511 151 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 SOX30O94993 753 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 CXCL14O95715 111 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 HPP00738 406 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 GABRA1P14867 456 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 AMD1P17707 334 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 PVALBP20472 110 aaPredicted RBP12.09□□□□□ -0.47
HERC3-203ENST00000407637 S100A11P31949 105 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 GAS1P54826 345 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 DGCR2P98153 550 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 TAP2Q03519 686 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 EIF4EBP2Q13542 120 aaPredicted RBP12.09□□□□□ -0.47
HERC3-203ENST00000407637 SCARB2Q14108 478 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 ATP13A5Q4VNC0 1218 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 USP50Q70EL3 339 aaPredicted RBP12.09□□□□□ -0.47
HERC3-203ENST00000407637 OAFQ86UD1 273 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 RELL2Q8NC24 303 aaPredicted RBP12.09□□□□□ -0.47
HERC3-203ENST00000407637 SCAMP5Q8TAC9 235 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 ASZ1Q8WWH4 475 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 MRPL48Q96GC5 212 aaKnown RBP12.09□□□□□ -0.47
HERC3-203ENST00000407637 ZNF582Q96NG8 517 aaPredicted RBP12.09□□□□□ -0.47
HERC3-203ENST00000407637 BTNL2Q9UIR0 455 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 DHRS7Q9Y394 339 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 ENPP4Q9Y6X5 453 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 TMEM129A0AVI4 362 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 IFNA4P05014 189 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 CELP19835 753 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 ITGB8P26012 769 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 CALCRP30988 508 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 RFC3P40938 356 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 RFX3P48380 749 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 E2F1Q01094 437 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 MAP4K2Q12851 820 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 ZNF235Q14590 738 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 TSC22D1Q15714 1073 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 B3GNTL1Q67FW5 361 aaPredicted RBP12.09□□□□□ -0.47
HERC3-203ENST00000407637 MTFR2Q6P444 385 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 RBMS3Q6XE24 437 aaKnown RBP12.09□□□□□ -0.47
HERC3-203ENST00000407637 TMUB2Q71RG4 321 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 JAZF1Q86VZ6 243 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 C12orf45Q8N5I9 185 aaPredicted RBP12.09□□□□□ -0.47
HERC3-203ENST00000407637 IL17RCQ8NAC3 791 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 BPIFCQ8NFQ6 507 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 OR56B4Q8NH76 319 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 TCEAL3Q969E4 200 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 RNFT2Q96EX2 444 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 ARL6Q9H0F7 186 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 RNF39Q9H2S5 420 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 SLC6A20Q9NP91 592 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 NTMQ9P121 344 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 CLEC4AQ9UMR7 237 aa12.09□□□□□ -0.47
HERC3-203ENST00000407637 COL4A4P53420 1690 aaPredicted RBP12.09□□□□□ -0.47
HERC3-203ENST00000407637 PMS2P1A4D2B8 440 aa12.08□□□□□ -0.47
HERC3-203ENST00000407637 ARRDC5A6NEK1 342 aa12.08□□□□□ -0.47
HERC3-203ENST00000407637 PRR23D1E9PI22 279 aaPredicted RBP12.08□□□□□ -0.47
HERC3-203ENST00000407637 FFAR1O14842 300 aa12.08□□□□□ -0.47
HERC3-203ENST00000407637 MID1O15344 667 aa12.08□□□□□ -0.47
HERC3-203ENST00000407637 GATCO43716 136 aaKnown RBP12.08□□□□□ -0.47
HERC3-203ENST00000407637 OR10H3O60404 316 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms