RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 ROR2Q01974 943 aaKnown RBP23.13■■□□□ 1.29
DNMT3A-206ENST00000406659 FAM214AQ32MH5 1076 aa23.13■■□□□ 1.29
DNMT3A-206ENST00000406659 LAIR1Q6GTX8 287 aa23.13■■□□□ 1.29
DNMT3A-206ENST00000406659 CDC73Q6P1J9 531 aa23.13■■□□□ 1.29
DNMT3A-206ENST00000406659 COMTD1Q86VU5 262 aa23.13■■□□□ 1.29
DNMT3A-206ENST00000406659 OR2L13Q8N349 312 aa23.13■■□□□ 1.29
DNMT3A-206ENST00000406659 PARP8Q8N3A8 854 aa23.13■■□□□ 1.29
DNMT3A-206ENST00000406659 FAM81AQ8TBF8 368 aa23.13■■□□□ 1.29
DNMT3A-206ENST00000406659 TANKQ92844 425 aa23.13■■□□□ 1.29
DNMT3A-206ENST00000406659 HSPA12BQ96MM6 686 aa23.13■■□□□ 1.29
DNMT3A-206ENST00000406659 SLC38A3Q99624 504 aa23.13■■□□□ 1.29
DNMT3A-206ENST00000406659 CDX2Q99626 313 aaPredicted RBP23.13■■□□□ 1.29
DNMT3A-206ENST00000406659 LDHAL6BQ9BYZ2 381 aaPredicted RBP23.13■■□□□ 1.29
DNMT3A-206ENST00000406659 SLC38A1Q9H2H9 487 aa23.13■■□□□ 1.29
DNMT3A-206ENST00000406659 ANKHQ9HCJ1 492 aa23.13■■□□□ 1.29
DNMT3A-206ENST00000406659 ERVK-18Q9QC07 812 aa23.13■■□□□ 1.29
DNMT3A-206ENST00000406659 ACAD8Q9UKU7 415 aa23.13■■□□□ 1.29
DNMT3A-206ENST00000406659 PRUNE2Q8WUY3 3088 aa23.13■■□□□ 1.29
DNMT3A-206ENST00000406659 KNL1Q8NG31 2342 aa23.13■■□□□ 1.29
DNMT3A-206ENST00000406659 FAAHO00519 579 aa23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 CYR61O00622 381 aa23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 HCRTR1O43613 425 aa23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 PCDHGA12O60330 932 aa23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 LDB3O75112 727 aa23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 SEMA7AO75326 666 aa23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 NME6O75414 186 aaPredicted RBP23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 SEC14L2O76054 403 aa23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 ELAVL4P26378 380 aaKnown RBP23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 PCSK6P29122 969 aa23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 PPM1FP49593 454 aaPredicted RBP23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 CSNK2BP67870 215 aa23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 HPCAP84074 193 aa23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 CHRNEQ04844 493 aa23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 NPTX1Q15818 432 aa23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 ZNF770Q6IQ21 691 aaPredicted RBP23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 WDR53Q7Z5U6 358 aaPredicted RBP23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 CAMKK1Q8N5S9 505 aa23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 ZNF540Q8NDQ6 660 aa23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 C12orf43Q96C57 262 aaKnown RBP23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 SPACA7Q96KW9 195 aa23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 LHPPQ9H008 270 aa23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 DUSP21Q9H596 190 aa23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 SLC13A4Q9UKG4 626 aa23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 SGK494L7N484 410 aa23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 NOL3O60936 208 aaKnown RBP23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 UGT2B17O75795 530 aa23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 GPR75O95800 540 aa23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 SMN1Q16637 294 aaKnown RBP23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 PUS10Q3MIT2 529 aaKnown RBP23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 ZNF311Q5JNZ3 666 aa23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 DEPDC4Q8N2C3 294 aa23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 SLC9A6Q92581 669 aa23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 FNDC11Q9BVV2 318 aa23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 TRIM45Q9H8W5 580 aaPredicted RBP23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 CCNB1IP1Q9NPC3 277 aa23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 A4GNTQ9UNA3 340 aa23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 MGAT4BQ9UQ53 548 aa23.12■■□□□ 1.29
DNMT3A-206ENST00000406659 LILRA5A6NI73 299 aa23.11■■□□□ 1.29
DNMT3A-206ENST00000406659 FAM227AF5H4B4 570 aa23.11■■□□□ 1.29
DNMT3A-206ENST00000406659 AQP9O43315 295 aa23.11■■□□□ 1.29
DNMT3A-206ENST00000406659 FGF17O60258 216 aa23.11■■□□□ 1.29
DNMT3A-206ENST00000406659 WBP4O75554 376 aaKnown RBP23.11■■□□□ 1.29
DNMT3A-206ENST00000406659 KRT20P35900 424 aa23.11■■□□□ 1.29
DNMT3A-206ENST00000406659 HNRNPKP61978 463 aaKnown RBP eCLIP23.11■■□□□ 1.29
DNMT3A-206ENST00000406659 SLC35A2P78381 396 aa23.11■■□□□ 1.29
DNMT3A-206ENST00000406659 KLHL17Q6TDP4 642 aa23.11■■□□□ 1.29
DNMT3A-206ENST00000406659 P3H2Q8IVL5 708 aa23.11■■□□□ 1.29
DNMT3A-206ENST00000406659 SLC16A11Q8NCK7 471 aa23.11■■□□□ 1.29
DNMT3A-206ENST00000406659 TMEM52Q8NDY8 209 aa23.11■■□□□ 1.29
DNMT3A-206ENST00000406659 QRSL1Q9H0R6 528 aaKnown RBP23.11■■□□□ 1.29
DNMT3A-206ENST00000406659 LIN28AQ9H9Z2 209 aaKnown RBP23.11■■□□□ 1.29
DNMT3A-206ENST00000406659 TBC1D17Q9HA65 648 aa23.11■■□□□ 1.29
DNMT3A-206ENST00000406659 OR10H3O60404 316 aa23.1■■□□□ 1.29
DNMT3A-206ENST00000406659 EPPINO95925 133 aa23.1■■□□□ 1.29
DNMT3A-206ENST00000406659 ADAP00813 363 aa23.1■■□□□ 1.29
DNMT3A-206ENST00000406659 FOSL2P15408 326 aa23.1■■□□□ 1.29
DNMT3A-206ENST00000406659 ITIH1P19827 911 aa23.1■■□□□ 1.29
DNMT3A-206ENST00000406659 NT5EP21589 574 aa23.1■■□□□ 1.29
DNMT3A-206ENST00000406659 CAPZBP47756 277 aa23.1■■□□□ 1.29
DNMT3A-206ENST00000406659 IDH2P48735 452 aaKnown RBP23.1■■□□□ 1.29
DNMT3A-206ENST00000406659 RAB38P57729 211 aa23.1■■□□□ 1.29
DNMT3A-206ENST00000406659 PIN1Q13526 163 aaPredicted RBP23.1■■□□□ 1.29
DNMT3A-206ENST00000406659 SEC23BQ15437 767 aa23.1■■□□□ 1.29
DNMT3A-206ENST00000406659 ZNF628Q5EBL2 1059 aa23.1■■□□□ 1.29
DNMT3A-206ENST00000406659 HEPHL1Q6MZM0 1159 aa23.1■■□□□ 1.29
DNMT3A-206ENST00000406659 SLC36A4Q6YBV0 504 aa23.1■■□□□ 1.29
DNMT3A-206ENST00000406659 FAM92BQ6ZTR7 304 aa23.1■■□□□ 1.29
DNMT3A-206ENST00000406659 IPCEF1Q8WWN9 437 aaPredicted RBP23.1■■□□□ 1.29
DNMT3A-206ENST00000406659 CDS1Q92903 461 aa23.1■■□□□ 1.29
DNMT3A-206ENST00000406659 MUL1Q969V5 352 aa23.1■■□□□ 1.29
DNMT3A-206ENST00000406659 MAP3K3Q99759 626 aa23.1■■□□□ 1.29
DNMT3A-206ENST00000406659 UCK2Q9BZX2 261 aa23.1■■□□□ 1.29
DNMT3A-206ENST00000406659 C19orf53Q9UNZ5 99 aaPredicted RBP23.1■■□□□ 1.29
DNMT3A-206ENST00000406659 SYT5O00445 386 aa23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 RDH16O75452 317 aa23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 ATP1B1P05026 303 aa23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 NXPH1P58417 271 aa23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 TRMT12Q53H54 448 aaKnown RBP23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 GTF2IRD2BQ6EKJ0 949 aa23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 GTF2IRD2Q86UP8 949 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms