RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 SYNDIG1LA6NDD5 238 aa19.63■□□□□ 0.73
TPM1-208ENST00000404484 SLC28A2O43868 658 aa19.63■□□□□ 0.73
TPM1-208ENST00000404484 COQ9O75208 318 aa19.63■□□□□ 0.73
TPM1-208ENST00000404484 BCHEP06276 602 aa19.63■□□□□ 0.73
TPM1-208ENST00000404484 MRPS35P82673 323 aaKnown RBP19.63■□□□□ 0.73
TPM1-208ENST00000404484 COL9A2Q14055 689 aaPredicted RBP19.63■□□□□ 0.73
TPM1-208ENST00000404484 PRICKLE4Q2TBC4 344 aa19.63■□□□□ 0.73
TPM1-208ENST00000404484 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.63■□□□□ 0.73
TPM1-208ENST00000404484 ARHGAP40Q5TG30 622 aa19.63■□□□□ 0.73
TPM1-208ENST00000404484 PRAMEF8Q5VWM4 474 aa19.63■□□□□ 0.73
TPM1-208ENST00000404484 PRAMEF7Q5VXH5 474 aa19.63■□□□□ 0.73
TPM1-208ENST00000404484 HMBOX1Q6NT76 420 aa19.63■□□□□ 0.73
TPM1-208ENST00000404484 CDC73Q6P1J9 531 aa19.63■□□□□ 0.73
TPM1-208ENST00000404484 ZCCHC12Q6PEW1 402 aa19.63■□□□□ 0.73
TPM1-208ENST00000404484 XAGE5Q8WWM1 108 aa19.63■□□□□ 0.73
TPM1-208ENST00000404484 DNAJC9Q8WXX5 260 aa19.63■□□□□ 0.73
TPM1-208ENST00000404484 RAB8BQ92930 207 aa19.63■□□□□ 0.73
TPM1-208ENST00000404484 RBM18Q96H35 190 aaKnown RBP19.63■□□□□ 0.73
TPM1-208ENST00000404484 TMEM19Q96HH6 336 aa19.63■□□□□ 0.73
TPM1-208ENST00000404484 ZNF578Q96N58 590 aaPredicted RBP19.63■□□□□ 0.73
TPM1-208ENST00000404484 DGAT2Q96PD7 388 aa19.63■□□□□ 0.73
TPM1-208ENST00000404484 ZNF607Q96SK3 696 aa19.63■□□□□ 0.73
TPM1-208ENST00000404484 YIPF2Q9BWQ6 316 aa19.63■□□□□ 0.73
TPM1-208ENST00000404484 NRSN2Q9GZP1 204 aa19.63■□□□□ 0.73
TPM1-208ENST00000404484 C8orf4Q9NR00 106 aa19.63■□□□□ 0.73
TPM1-208ENST00000404484 MAT2BQ9NZL9 334 aa19.63■□□□□ 0.73
TPM1-208ENST00000404484 CALML5Q9NZT1 146 aa19.63■□□□□ 0.73
TPM1-208ENST00000404484 COL27A1Q8IZC6 1860 aaPredicted RBP19.62■□□□□ 0.73
TPM1-208ENST00000404484 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 CLOCKO15516 846 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 SOX30O94993 753 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 NR2F1P10589 423 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 GALNSP34059 522 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 OR1D4P47884 311 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 CRISP3P54108 245 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 SELENOWP63302 87 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 MAP4K2Q12851 820 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 LRRC36Q1X8D7 754 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 FHL5Q5TD97 284 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 MFSD12Q6NUT3 480 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 FAM111BQ6SJ93 734 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 IZUMO2Q6UXV1 221 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 B3GNT8Q7Z7M8 397 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 KRT73Q86Y46 540 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 GALNT12Q8IXK2 581 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 AGBL5Q8NDL9 886 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 OR5D16Q8NGK9 328 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 BBS10Q8TAM1 723 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 FAM110BQ8TC76 370 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 ADAMTS15Q8TE58 950 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 RASSF5Q8WWW0 418 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 GIMAP5Q96F15 307 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 HSH2DQ96JZ2 352 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 OR7D2Q96RA2 312 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 DOHHQ9BU89 302 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 ALOXE3Q9BYJ1 711 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 SEMA6AQ9H2E6 1030 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 MKKSQ9NPJ1 570 aaPredicted RBP19.62■□□□□ 0.73
TPM1-208ENST00000404484 EQTNQ9NQ60 294 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 EXD2Q9NVH0 621 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 CNOT11Q9UKZ1 510 aaKnown RBP19.62■□□□□ 0.73
TPM1-208ENST00000404484 BAG5Q9UL15 447 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 URB1O60287 2271 aaKnown RBP19.62■□□□□ 0.73
TPM1-208ENST00000404484 USP24Q9UPU5 2620 aa19.62■□□□□ 0.73
TPM1-208ENST00000404484 LAMA5O15230 3695 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 MAGEA2P43356 314 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 STT3AP46977 705 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 ZFP36L1Q07352 338 aaKnown RBP19.61■□□□□ 0.73
TPM1-208ENST00000404484 IL11RAQ14626 422 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 RTP5Q14D33 572 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 NKG7Q16617 165 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 QSOX2Q6ZRP7 698 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 PPP1R3BQ86XI6 285 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 SLC44A2Q8IWA5 706 aaPredicted RBP19.61■□□□□ 0.73
TPM1-208ENST00000404484 VWA5B2Q8N398 1253 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 RIT1Q92963 219 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 CTHRC1Q96CG8 243 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 SPATA5L1Q9BVQ7 753 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 CCDC86Q9H6F5 360 aaKnown RBP19.61■□□□□ 0.73
TPM1-208ENST00000404484 IL1RAPQ9NPH3 570 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 DNAJB9Q9UBS3 223 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 LRRC42Q9Y546 428 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 A0A1W2PNU3 283 aaPredicted RBP19.61■□□□□ 0.73
TPM1-208ENST00000404484 M0QX08 132 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 TAF4O00268 1085 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 GCM2O75603 506 aaPredicted RBP19.61■□□□□ 0.73
TPM1-208ENST00000404484 SERPINB7O75635 380 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 CDC123O75794 336 aaPredicted RBP19.61■□□□□ 0.73
TPM1-208ENST00000404484 PGM3O95394 542 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 GALNT10Q86SR1 603 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 ZDHHC21Q8IVQ6 265 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 SHISA5Q8N114 240 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 CDRT4Q8N9R6 151 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 ICA1LQ8NDH6 482 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 TAMM41Q96BW9 452 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 C16orf58Q96GQ5 468 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 TPD52L3Q96J77 140 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 YIPF4Q9BSR8 244 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 C9orf16Q9BUW7 83 aa19.61■□□□□ 0.73
TPM1-208ENST00000404484 CXorf21Q9HAI6 301 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms