RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 VAPAQ9P0L0 249 aa30.9■■■□□ 2.54
CSNK1E-204ENST00000403904 CHI3L1P36222 383 aaPredicted RBP30.89■■■□□ 2.54
CSNK1E-204ENST00000403904 MS4A4EQ96PG1 132 aa30.89■■■□□ 2.54
CSNK1E-204ENST00000403904 DEFB126Q9BYW3 111 aa30.89■■■□□ 2.54
CSNK1E-204ENST00000403904 ZMIZ1Q9ULJ6 1067 aa30.89■■■□□ 2.54
CSNK1E-204ENST00000403904 KCNMB2Q9Y691 235 aa30.89■■■□□ 2.54
CSNK1E-204ENST00000403904 CCT8L1PA6NM43 557 aa30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 OR6C76A6NM76 312 aa30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 HMGN2P05204 90 aaKnown RBP30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 ITGA3P26006 1051 aa30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 CXADRP78310 365 aa30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 EBPQ15125 230 aaKnown RBP30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 SLC29A4Q7RTT9 530 aa30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 WDR53Q7Z5U6 358 aaPredicted RBP30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 DNAJB8Q8NHS0 232 aa30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 ZFP90Q8TF47 636 aa30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 C16orf58Q96GQ5 468 aa30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 GAL3ST4Q96RP7 486 aa30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 LIN28AQ9H9Z2 209 aaKnown RBP30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 EFCAB1Q9HAE3 211 aa30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 FOLH1BQ9HBA9 442 aa30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 ZKSCAN7Q9P0L1 754 aaPredicted RBP30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 PRODH2Q9UF12 536 aa30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 ZFAND5O76080 213 aa30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 CASP9P55211 416 aa30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 LASP1Q14847 261 aaKnown RBP30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 MYBPC3Q14896 1274 aa30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 TRMT5Q32P41 509 aaKnown RBP30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 BHLHB9Q6PI77 547 aa30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 ANGPTL8Q6UXH0 198 aa30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 BRIX1Q8TDN6 353 aaKnown RBP30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 NSL1Q96IY1 281 aa30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 YIPF4Q9BSR8 244 aa30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 ITPAQ9BY32 194 aa30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 EPS8L2Q9H6S3 715 aa30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 GPATCH2Q9NW75 528 aa30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 CFL2Q9Y281 166 aa30.88■■■□□ 2.53
CSNK1E-204ENST00000403904 DSPP15924 2871 aaKnown RBP30.87■■■□□ 2.53
CSNK1E-204ENST00000403904 TRBV5-3A0A0A0MS03 114 aa30.87■■■□□ 2.53
CSNK1E-204ENST00000403904 C2orf92A0A1B0GVN3 265 aa30.87■■■□□ 2.53
CSNK1E-204ENST00000403904 A8MUI8 341 aa30.87■■■□□ 2.53
CSNK1E-204ENST00000403904 DNAJB5O75953 348 aa30.87■■■□□ 2.53
CSNK1E-204ENST00000403904 ZNF155Q12901 538 aaPredicted RBP30.87■■■□□ 2.53
CSNK1E-204ENST00000403904 CAPRIN1Q14444 709 aaKnown RBP30.87■■■□□ 2.53
CSNK1E-204ENST00000403904 SAXO2Q658L1 398 aa30.87■■■□□ 2.53
CSNK1E-204ENST00000403904 GALNT16Q8N428 558 aa30.87■■■□□ 2.53
CSNK1E-204ENST00000403904 OR8K3Q8NH51 312 aa30.87■■■□□ 2.53
CSNK1E-204ENST00000403904 PNPT1Q8TCS8 783 aaKnown RBP30.87■■■□□ 2.53
CSNK1E-204ENST00000403904 NEURL3Q96EH8 262 aa30.87■■■□□ 2.53
CSNK1E-204ENST00000403904 VSTM2LQ96N03 204 aa30.87■■■□□ 2.53
CSNK1E-204ENST00000403904 SLC39A3Q9BRY0 314 aa30.87■■■□□ 2.53
CSNK1E-204ENST00000403904 WWTR1Q9GZV5 400 aa30.87■■■□□ 2.53
CSNK1E-204ENST00000403904 TPT1P8Q9HAU6 139 aa30.87■■■□□ 2.53
CSNK1E-204ENST00000403904 A6NL46 340 aa30.86■■■□□ 2.53
CSNK1E-204ENST00000403904 UBOX5O94941 541 aa30.86■■■□□ 2.53
CSNK1E-204ENST00000403904 ESRRAP11474 423 aaPredicted RBP30.86■■■□□ 2.53
CSNK1E-204ENST00000403904 RPS26P62854 115 aaKnown RBP30.86■■■□□ 2.53
CSNK1E-204ENST00000403904 AP2B1P63010 937 aa30.86■■■□□ 2.53
CSNK1E-204ENST00000403904 MFSD12Q6NUT3 480 aa30.86■■■□□ 2.53
CSNK1E-204ENST00000403904 SIRT6Q8N6T7 355 aa30.86■■■□□ 2.53
CSNK1E-204ENST00000403904 FBXO30Q8TB52 745 aa30.86■■■□□ 2.53
CSNK1E-204ENST00000403904 LRRC58Q96CX6 371 aa30.86■■■□□ 2.53
CSNK1E-204ENST00000403904 CGREF1Q99674 301 aa30.86■■■□□ 2.53
CSNK1E-204ENST00000403904 LHPPQ9H008 270 aa30.86■■■□□ 2.53
CSNK1E-204ENST00000403904 NIPSNAP3AQ9UFN0 247 aaPredicted RBP30.86■■■□□ 2.53
CSNK1E-204ENST00000403904 NUDT2P50583 147 aa30.85■■■□□ 2.53
CSNK1E-204ENST00000403904 CCL11P51671 97 aa30.85■■■□□ 2.53
CSNK1E-204ENST00000403904 FCRLBQ6BAA4 426 aa30.85■■■□□ 2.53
CSNK1E-204ENST00000403904 C16orf47Q6ZP98 133 aaPredicted RBP30.85■■■□□ 2.53
CSNK1E-204ENST00000403904 PSMF1Q92530 271 aa30.85■■■□□ 2.53
CSNK1E-204ENST00000403904 SLC35G5Q96KT7 338 aa30.85■■■□□ 2.53
CSNK1E-204ENST00000403904 GID8Q9NWU2 228 aa30.85■■■□□ 2.53
CSNK1E-204ENST00000403904 TMEM200CA6NKL6 621 aa30.84■■■□□ 2.53
CSNK1E-204ENST00000403904 FXYD1O00168 92 aa30.84■■■□□ 2.53
CSNK1E-204ENST00000403904 CLIC1O00299 241 aa30.84■■■□□ 2.53
CSNK1E-204ENST00000403904 T-ENOLP0DO92 83 aa30.84■■■□□ 2.53
CSNK1E-204ENST00000403904 ART3Q13508 389 aa30.84■■■□□ 2.53
CSNK1E-204ENST00000403904 RAPSNQ13702 412 aa30.84■■■□□ 2.53
CSNK1E-204ENST00000403904 HLA-DQA1Q5Y7H0 255 aa30.84■■■□□ 2.53
CSNK1E-204ENST00000403904 TCTN3Q6NUS6 607 aa30.84■■■□□ 2.53
CSNK1E-204ENST00000403904 JMJD6Q6NYC1 403 aaPredicted RBP30.84■■■□□ 2.53
CSNK1E-204ENST00000403904 C6orf89Q6UWU4 347 aa30.84■■■□□ 2.53
CSNK1E-204ENST00000403904 APLFQ8IW19 511 aaPredicted RBP30.84■■■□□ 2.53
CSNK1E-204ENST00000403904 ADIPOR1Q96A54 375 aa30.84■■■□□ 2.53
CSNK1E-204ENST00000403904 OTUB1Q96FW1 271 aaPredicted RBP30.84■■■□□ 2.53
CSNK1E-204ENST00000403904 TRIM8Q9BZR9 551 aa30.84■■■□□ 2.53
CSNK1E-204ENST00000403904 UNC5CO95185 931 aa30.83■■■□□ 2.53
CSNK1E-204ENST00000403904 NPPAP01160 153 aa30.83■■■□□ 2.53
CSNK1E-204ENST00000403904 CORO7P57737 925 aa30.83■■■□□ 2.53
CSNK1E-204ENST00000403904 NNATQ16517 81 aa30.83■■■□□ 2.53
CSNK1E-204ENST00000403904 RNF130Q86XS8 419 aa30.83■■■□□ 2.53
CSNK1E-204ENST00000403904 OR5L2Q8NGL0 311 aa30.83■■■□□ 2.53
CSNK1E-204ENST00000403904 NUBPLQ8TB37 319 aa30.83■■■□□ 2.53
CSNK1E-204ENST00000403904 JADE3Q92613 823 aa30.83■■■□□ 2.53
CSNK1E-204ENST00000403904 ANKRD27Q96NW4 1050 aa30.83■■■□□ 2.53
CSNK1E-204ENST00000403904 SERHL2Q9H4I8 314 aa30.83■■■□□ 2.53
CSNK1E-204ENST00000403904 FAF1Q9UNN5 650 aaPredicted RBP30.83■■■□□ 2.53
CSNK1E-204ENST00000403904 KRT75O95678 551 aa30.83■■■□□ 2.53
CSNK1E-204ENST00000403904 MATN1P21941 496 aa30.83■■■□□ 2.53
CSNK1E-204ENST00000403904 PRIM2P49643 509 aa30.83■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms