RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 POP5Q969H6 163 aaKnown RBP6.96□□□□□ -1.29
USP16-204ENST00000399976 UTP23Q9BRU9 249 aaKnown RBP6.96□□□□□ -1.29
USP16-204ENST00000399976 NMUR2Q9GZQ4 415 aa6.96□□□□□ -1.29
USP16-204ENST00000399976 TIMMDC1Q9NPL8 285 aa6.96□□□□□ -1.29
USP16-204ENST00000399976 SERHLQ9NQF3 203 aa6.96□□□□□ -1.29
USP16-204ENST00000399976 FGFR1OP2Q9NVK5 253 aa6.96□□□□□ -1.29
USP16-204ENST00000399976 GPATCH2Q9NW75 528 aa6.96□□□□□ -1.29
USP16-204ENST00000399976 VPS4AQ9UN37 437 aa6.96□□□□□ -1.29
USP16-204ENST00000399976 ERVK-19Q9WJR5 959 aa6.96□□□□□ -1.29
USP16-204ENST00000399976 LIPT1Q9Y234 373 aa6.96□□□□□ -1.29
USP16-204ENST00000399976 NDUFAF1Q9Y375 327 aa6.96□□□□□ -1.29
USP16-204ENST00000399976 COPG1Q9Y678 874 aaKnown RBP6.96□□□□□ -1.29
USP16-204ENST00000399976 SEC16AO15027 2179 aa6.96□□□□□ -1.29
USP16-204ENST00000399976 DNAH14Q0VDD8 3507 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 C15orf38-AP3S2A0A0A6YYH1 394 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 TP53I11O14683 189 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 DIAPH2O60879 1101 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 DNAJA2O60884 412 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 IL33O95760 270 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 CT62P0C5K7 136 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 LAMP1P11279 417 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 TNNI3P19429 210 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 NT5EP21589 574 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 ITGA3P26006 1051 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 MANFP55145 182 aaKnown RBP6.96□□□□□ -1.3
USP16-204ENST00000399976 KCNK10P57789 538 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 DUSP2Q05923 314 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 GNA13Q14344 377 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 GLYR1Q49A26 553 aaPredicted RBP6.96□□□□□ -1.3
USP16-204ENST00000399976 MFSD12Q6NUT3 480 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 ARPINQ7Z6K5 226 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 EXD3Q8N9H8 876 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 OR7G2Q8NG99 324 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 SPPL2AQ8TCT8 520 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 HGDQ93099 445 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 EXOSC8Q96B26 276 aaKnown RBP6.96□□□□□ -1.3
USP16-204ENST00000399976 ROPN1LQ96C74 230 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 C8orf44Q96CB5 159 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 SPACA9Q96E40 222 aaPredicted RBP6.96□□□□□ -1.3
USP16-204ENST00000399976 G6PC3Q9BUM1 346 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 WDR55Q9H6Y2 383 aaPredicted RBP6.96□□□□□ -1.3
USP16-204ENST00000399976 CALML5Q9NZT1 146 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 LEF1Q9UJU2 399 aaPredicted RBP6.96□□□□□ -1.3
USP16-204ENST00000399976 ADAM21Q9UKJ8 722 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 PCDHGB4Q9UN71 923 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 FIS1Q9Y3D6 152 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 ATP6AP2A0A1C7CYW4 349 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 ATP6AP2O75787 350 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 DCTN3O75935 186 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 SNX4O95219 450 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 GBAP04062 536 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 PRKAR1AP10644 381 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 PIGAP37287 484 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 ALDH9A1P49189 494 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 CYB561P49447 251 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 KHKP50053 298 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 ZNF267Q14586 743 aaPredicted RBP6.96□□□□□ -1.3
USP16-204ENST00000399976 ZNF169Q14929 603 aaPredicted RBP6.96□□□□□ -1.3
USP16-204ENST00000399976 RPS6KA2Q15349 733 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 ZSCAN26Q16670 478 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.96□□□□□ -1.3
USP16-204ENST00000399976 DGAT2L6Q6ZPD8 337 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 CMIPQ8IY22 773 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 FAM98AQ8NCA5 519 aaKnown RBP6.96□□□□□ -1.3
USP16-204ENST00000399976 OR9A2Q8NGT5 310 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 RP9Q8TA86 221 aaKnown RBP6.96□□□□□ -1.3
USP16-204ENST00000399976 AGR3Q8TD06 166 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 FAM120BQ96EK7 910 aaKnown RBP6.96□□□□□ -1.3
USP16-204ENST00000399976 RASL10BQ96S79 203 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 C1orf50Q9BV19 199 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 BTBD2Q9BX70 525 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 ANGPTL4Q9BY76 406 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 RBCK1Q9BYM8 510 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 YY1AP1Q9H869 796 aa6.96□□□□□ -1.3
USP16-204ENST00000399976 ERAL1O75616 437 aaKnown RBP6.95□□□□□ -1.3
USP16-204ENST00000399976 CDC123O75794 336 aaPredicted RBP6.95□□□□□ -1.3
USP16-204ENST00000399976 VIMP08670 466 aaKnown RBP6.95□□□□□ -1.3
USP16-204ENST00000399976 CT45A8P0DMV1 189 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 CT45A9P0DMV2 189 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 CD46P15529 392 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 IL12AP29459 219 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 SUMO3P55854 103 aaPredicted RBP6.95□□□□□ -1.3
USP16-204ENST00000399976 ARHGAP11BQ3KRB8 267 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 CT45A2Q5DJT8 189 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 HLA-DQA1Q5Y7H0 255 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 FAM47EQ6ZV65 393 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 ASB18Q6ZVZ8 466 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 FUNDC1Q8IVP5 155 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 RBMXL3Q8N7X1 1067 aaKnown RBP6.95□□□□□ -1.3
USP16-204ENST00000399976 BHLHE22Q8NFJ8 381 aaPredicted RBP6.95□□□□□ -1.3
USP16-204ENST00000399976 OR7A2PQ8NGA2 310 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 RFWD2Q8NHY2 731 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 DIO2Q92813 273 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 SPDL1Q96EA4 605 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 ABHD17AQ96GS6 310 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 EBF4Q9BQW3 602 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 ARHGAP9Q9BRR9 750 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 TMEM38AQ9H6F2 299 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 Q9N2J8 555 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 NPHS2Q9NP85 383 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms