RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 GPR137Q96N19 417 aa13.2□□□□□ -0.3
APOB-202ENST00000399256 FGF20Q9NP95 211 aaPredicted RBP13.2□□□□□ -0.3
APOB-202ENST00000399256 ELF5Q9UKW6 265 aaPredicted RBP13.2□□□□□ -0.3
APOB-202ENST00000399256 DYRK1BQ9Y463 629 aa13.2□□□□□ -0.3
APOB-202ENST00000399256 PRODHO43272 600 aa13.2□□□□□ -0.3
APOB-202ENST00000399256 B4GALT2O60909 372 aa13.2□□□□□ -0.3
APOB-202ENST00000399256 MANFP55145 182 aaKnown RBP13.2□□□□□ -0.3
APOB-202ENST00000399256 SYPL1Q16563 259 aa13.2□□□□□ -0.3
APOB-202ENST00000399256 ZNF791Q3KP31 576 aaPredicted RBP13.2□□□□□ -0.3
APOB-202ENST00000399256 CLEC12AQ5QGZ9 265 aa13.2□□□□□ -0.3
APOB-202ENST00000399256 MZT2AQ6P582 158 aa13.2□□□□□ -0.3
APOB-202ENST00000399256 C22orf39Q6P5X5 142 aa13.2□□□□□ -0.3
APOB-202ENST00000399256 CD200R1LQ6Q8B3 271 aa13.2□□□□□ -0.3
APOB-202ENST00000399256 SLC36A4Q6YBV0 504 aa13.2□□□□□ -0.3
APOB-202ENST00000399256 LRRC17Q8N6Y2 441 aa13.2□□□□□ -0.3
APOB-202ENST00000399256 RASGEF1AQ8N9B8 481 aa13.2□□□□□ -0.3
APOB-202ENST00000399256 ZNF680Q8NEM1 530 aa13.2□□□□□ -0.3
APOB-202ENST00000399256 OR4F15Q8NGB8 312 aa13.2□□□□□ -0.3
APOB-202ENST00000399256 UCN3Q969E3 161 aa13.2□□□□□ -0.3
APOB-202ENST00000399256 OTULINQ96BN8 352 aa13.2□□□□□ -0.3
APOB-202ENST00000399256 NEURL3Q96EH8 262 aa13.2□□□□□ -0.3
APOB-202ENST00000399256 RIOK2Q9BVS4 552 aaKnown RBP13.2□□□□□ -0.3
APOB-202ENST00000399256 ING4Q9UNL4 249 aa13.2□□□□□ -0.3
APOB-202ENST00000399256 FOXE1O00358 373 aaPredicted RBP13.19□□□□□ -0.3
APOB-202ENST00000399256 RTCAO00442 366 aaKnown RBP13.19□□□□□ -0.3
APOB-202ENST00000399256 OR7A10O76100 309 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 C1GALT1C1LP0DN25 315 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 POLR2CP19387 275 aaPredicted RBP13.19□□□□□ -0.3
APOB-202ENST00000399256 SDHBP21912 280 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 SMSP52788 366 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 CDK5Q00535 292 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 ELAVL2Q12926 359 aaKnown RBP13.19□□□□□ -0.3
APOB-202ENST00000399256 ANGPT1Q15389 498 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 IDNKQ5T6J7 187 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 SLC8B1Q6J4K2 584 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 ZNF782Q6ZMW2 699 aaPredicted RBP13.19□□□□□ -0.3
APOB-202ENST00000399256 C6orf120Q7Z4R8 191 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 TMEM150AQ86TG1 271 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 SLC43A3Q8NBI5 491 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 OR6C4Q8NGE1 309 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 EVA1BQ9NVM1 165 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 YIPF1Q9Y548 306 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 DOCK6Q96HP0 2047 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 LINC00862A6NCI5 91 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 HMGN4O00479 90 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 SLC1A3P43003 542 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 SMIM11AP58511 58 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 SLC25A30Q5SVS4 291 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 LSRQ86X29 649 aaPredicted RBP13.19□□□□□ -0.3
APOB-202ENST00000399256 C2orf73Q8N5S3 287 aaPredicted RBP13.19□□□□□ -0.3
APOB-202ENST00000399256 ARIH2OSQ8N7S6 290 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 OR11H7Q8NGC8 314 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 OR11H4Q8NGC9 324 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 SAP130Q9H0E3 1048 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 PIGUQ9H490 435 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 ZFP64Q9NPA5 681 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 TAS2R7Q9NYW3 318 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 EXOSC1Q9Y3B2 195 aaKnown RBP13.19□□□□□ -0.3
APOB-202ENST00000399256 PPIL1Q9Y3C6 166 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 HRO43593 1189 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 NTN1O95631 604 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 CH25HO95992 272 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 TFPIP10646 304 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 SLC6A1P30531 599 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 NNMTP40261 264 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 ATP12AP54707 1039 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 EFNB1P98172 346 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 RGS1Q08116 209 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 ZDHHC20Q5W0Z9 365 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 BICRALQ6AI39 1079 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 HIST2H2AA3Q6FI13 130 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 Q6ZNB5 142 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 GHDCQ8N2G8 530 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 OR5D16Q8NGK9 328 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 MYLIPQ8WY64 445 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 MSANTD3Q96H12 275 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 FOPNLQ96NB1 174 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 KCNK12Q9HB15 430 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 FOLH1BQ9HBA9 442 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 STARD7Q9NQZ5 370 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 MAN2C1Q9NTJ4 1040 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 ACAD8Q9UKU7 415 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 NUP50Q9UKX7 468 aa13.19□□□□□ -0.3
APOB-202ENST00000399256 PLXND1Q9Y4D7 1925 aa13.18□□□□□ -0.3
APOB-202ENST00000399256 TEX51A0A1B0GUA7 166 aa13.18□□□□□ -0.3
APOB-202ENST00000399256 SYPP08247 313 aa13.18□□□□□ -0.3
APOB-202ENST00000399256 MLLT1Q03111 559 aaPredicted RBP13.18□□□□□ -0.3
APOB-202ENST00000399256 Q6ZVU0 165 aa13.18□□□□□ -0.3
APOB-202ENST00000399256 KLHDC8AQ8IYD2 350 aa13.18□□□□□ -0.3
APOB-202ENST00000399256 ZNF655Q8N720 491 aaPredicted RBP13.18□□□□□ -0.3
APOB-202ENST00000399256 OR8D4Q8NGM9 314 aa13.18□□□□□ -0.3
APOB-202ENST00000399256 ZNF607Q96SK3 696 aa13.18□□□□□ -0.3
APOB-202ENST00000399256 TREX2Q9BQ50 279 aaPredicted RBP13.18□□□□□ -0.3
APOB-202ENST00000399256 EFCAB11Q9BUY7 163 aa13.18□□□□□ -0.3
APOB-202ENST00000399256 PRR14Q9BWN1 585 aa13.18□□□□□ -0.3
APOB-202ENST00000399256 ABCG5Q9H222 651 aa13.18□□□□□ -0.3
APOB-202ENST00000399256 ISYNA1Q9NPH2 558 aa13.18□□□□□ -0.3
APOB-202ENST00000399256 ADAM30Q9UKF2 790 aa13.18□□□□□ -0.3
APOB-202ENST00000399256 PDPK1O15530 556 aa13.18□□□□□ -0.3
APOB-202ENST00000399256 PNLIPRP1P54315 467 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms