RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 SLC38A5Q8WUX1 472 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 C12orf66Q96MD2 445 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 PTPN18Q99952 460 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 TMEM43Q9BTV4 400 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 NLNQ9BYT8 704 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 ENOPH1Q9UHY7 261 aa9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 MKI67P46013 3256 aaKnown RBP9.34□□□□□ -0.91
PTCHD4-202ENST00000398738 ZNF197O14709 1029 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 PDPK1O15530 556 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 SLC28A2O43868 658 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 ZNF30P17039 623 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 ELK1P19419 428 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 CLDN20P56880 219 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 PPP3R1P63098 170 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 DSC1Q08554 894 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 COX10Q12887 443 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 SLBPQ14493 270 aaKnown RBP eCLIP9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 WASH2PQ6VEQ5 465 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 LUZP2Q86TE4 346 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 CHCHD4Q8N4Q1 142 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 SAMD12Q8N8I0 201 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 SLC43A3Q8NBI5 491 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 DNAJA4Q8WW22 397 aaPredicted RBP9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 SMG7Q92540 1137 aaKnown RBP9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 KAT2AQ92830 837 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 C11orf24Q96F05 449 aaPredicted RBP9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 UROC1Q96N76 676 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 ZNF582Q96NG8 517 aaPredicted RBP9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 NRTNQ99748 197 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 GPA33Q99795 319 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 CLEC4MQ9H2X3 399 aaPredicted RBP9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 PPP1R3EQ9H7J1 279 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 ENAMQ9NRM1 1142 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 B3GNT2Q9NY97 397 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 FBXO9Q9UK97 447 aaPredicted RBP9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 ZNF840PA6NDX5 716 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 ANHXE9PGG2 379 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 SSNA1O43805 119 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 VNN2O95498 520 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 CD3GP09693 182 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 PDHA2P29803 388 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 BUD31P41223 144 aaPredicted RBP9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 GIPRP48546 466 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 PXNP49023 591 aaPredicted RBP9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 DGKGP49619 791 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 HNMTP50135 292 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 MANFP55145 182 aaKnown RBP9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 WDR5P61964 334 aaKnown RBP9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 CRYZQ08257 329 aaKnown RBP9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 ZNF763Q0D2J5 394 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 PLK5Q496M5 336 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 GGTA1PQ4G0N0 100 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 RAET1GQ6H3X3 334 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 REEP3Q6NUK4 255 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 PGBD2Q6P3X8 592 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 PODNL1Q6PEZ8 512 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 KLBQ86Z14 1044 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 OXR1Q8N573 874 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 GALNT6Q8NCL4 622 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 GPR32P1Q8NGA4 272 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 OR5D16Q8NGK9 328 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 EXOSC8Q96B26 276 aaKnown RBP9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 FNDC11Q9BVV2 318 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 C1QTNF7Q9BXJ2 289 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 RSPO3Q9BXY4 272 aaPredicted RBP9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 TTTY10Q9BZA0 68 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 PLA2G12AQ9BZM1 189 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 QRSL1Q9H0R6 528 aaKnown RBP9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 CXorf36Q9H7Y0 433 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 RC3H2Q9HBD1 1191 aaKnown RBP9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 THSD1Q9NS62 852 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 SPATA6Q9NWH7 488 aaPredicted RBP9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 CNIH4Q9P003 139 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 GULP1Q9UBP9 304 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 SH2B3Q9UQQ2 575 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 KCNE2Q9Y6J6 123 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 CHP2O43745 196 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 HCN1O60741 890 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 SERPINI2O75830 405 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 CFDP00746 253 aaPredicted RBP9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 ADAP00813 363 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 SERPIND1P05546 499 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 ATP1B2P14415 290 aaPredicted RBP9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 EVX1P49640 407 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 CCR6P51684 374 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 SLC16A1P53985 500 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 EPHA5P54756 1037 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 RAB14P61106 215 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 ILKQ13418 452 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 TAF1CQ15572 869 aaPredicted RBP9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 NTRK2Q16620 822 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 GPR33Q49SQ1 333 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 MEDAGQ5VYS4 303 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 ZNF770Q6IQ21 691 aaPredicted RBP9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 Q6ZVL8 140 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 KANSL1Q7Z3B3 1105 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 SERINC5Q86VE9 423 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 OR11H7Q8NGC8 314 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 OR4K5Q8NGD3 323 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 TMEM159Q96B96 161 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms