RNA–Protein interactions for RNA: ENST00000398529.7

RAB1A-201, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB1A, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-201ENST00000398529 DOHHQ9BU89 302 aa13.15□□□□□ -0.3
RAB1A-201ENST00000398529 AICDAQ9GZX7 198 aa13.15□□□□□ -0.3
RAB1A-201ENST00000398529 SLC6A15Q9H2J7 730 aa13.15□□□□□ -0.3
RAB1A-201ENST00000398529 RNF11Q9Y3C5 154 aa13.15□□□□□ -0.3
RAB1A-201ENST00000398529 NSD1Q96L73 2696 aaPredicted RBP13.15□□□□□ -0.31
RAB1A-201ENST00000398529 EEF1E1-BLOC1S5C9J1V9 151 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 TP53I11O14683 189 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 CASKO14936 926 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 EEF1E1O43324 174 aaKnown RBP13.14□□□□□ -0.31
RAB1A-201ENST00000398529 OR4F21O95013 312 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 CLDN9O95484 217 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 HEXAP06865 529 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 RFPL3SP0C7P2 107 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 NEFHP12036 1026 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 ENDOUP21128 410 aaKnown RBP13.14□□□□□ -0.31
RAB1A-201ENST00000398529 BGNP21810 368 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 HOXC12P31275 282 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 CEACAM8P31997 349 aaPredicted RBP13.14□□□□□ -0.31
RAB1A-201ENST00000398529 OPRM1P35372 400 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 GCKP35557 465 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 SORDQ00796 357 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 LCP2Q13094 533 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 TOMM20Q15388 145 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 CHI3L2Q15782 390 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 AP5B1Q2VPB7 878 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 ADPRMQ3LIE5 342 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 ACSF3Q4G176 576 aaPredicted RBP13.14□□□□□ -0.31
RAB1A-201ENST00000398529 TBCELQ5QJ74 424 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 MILR1Q7Z6M3 343 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 MYLK4Q86YV6 388 aaPredicted RBP13.14□□□□□ -0.31
RAB1A-201ENST00000398529 P3H2Q8IVL5 708 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 TAGAPQ8N103 731 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 LRRC25Q8N386 305 aaPredicted RBP13.14□□□□□ -0.31
RAB1A-201ENST00000398529 OR4F6Q8NGB9 312 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 OR6Y1Q8NGX8 325 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 PPP1R14CQ8TAE6 165 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 ZNF721Q8TF20 911 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 ZNF597Q96LX8 424 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 CDK15Q96Q40 435 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 F2RL3Q96RI0 385 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 SMR3AQ99954 134 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 ZNF490Q9ULM2 529 aaPredicted RBP13.14□□□□□ -0.31
RAB1A-201ENST00000398529 CAMK2AQ9UQM7 478 aa13.14□□□□□ -0.31
RAB1A-201ENST00000398529 NCKAP5O14513 1909 aa13.13□□□□□ -0.31
RAB1A-201ENST00000398529 CLCA1A8K7I4 914 aa13.13□□□□□ -0.31
RAB1A-201ENST00000398529 ETHE1O95571 254 aa13.13□□□□□ -0.31
RAB1A-201ENST00000398529 SERPINE1P05121 402 aa13.13□□□□□ -0.31
RAB1A-201ENST00000398529 CHN1P15882 459 aa13.13□□□□□ -0.31
RAB1A-201ENST00000398529 CPN2P22792 545 aa13.13□□□□□ -0.31
RAB1A-201ENST00000398529 CTSSP25774 331 aa13.13□□□□□ -0.31
RAB1A-201ENST00000398529 TLX1P31314 330 aaPredicted RBP13.13□□□□□ -0.31
RAB1A-201ENST00000398529 STT3AP46977 705 aa13.13□□□□□ -0.31
RAB1A-201ENST00000398529 PKNOX1P55347 436 aa13.13□□□□□ -0.31
RAB1A-201ENST00000398529 PLIN5Q00G26 463 aa13.13□□□□□ -0.31
RAB1A-201ENST00000398529 ID2Q02363 134 aa13.13□□□□□ -0.31
RAB1A-201ENST00000398529 DUSP8Q13202 625 aa13.13□□□□□ -0.31
RAB1A-201ENST00000398529 GGTA1PQ4G0N0 100 aa13.13□□□□□ -0.31
RAB1A-201ENST00000398529 LETMD1Q6P1Q0 360 aa13.13□□□□□ -0.31
RAB1A-201ENST00000398529 MED27Q6P2C8 311 aa13.13□□□□□ -0.31
RAB1A-201ENST00000398529 GPRIN3Q6ZVF9 776 aa13.13□□□□□ -0.31
RAB1A-201ENST00000398529 PACS2Q86VP3 889 aa13.13□□□□□ -0.31
RAB1A-201ENST00000398529 LINC01560Q8TB33 94 aa13.13□□□□□ -0.31
RAB1A-201ENST00000398529 UBE2E3Q969T4 207 aa13.13□□□□□ -0.31
RAB1A-201ENST00000398529 GAL3ST4Q96RP7 486 aa13.13□□□□□ -0.31
RAB1A-201ENST00000398529 TRMOQ9BU70 441 aa13.13□□□□□ -0.31
RAB1A-201ENST00000398529 MID1IP1Q9NPA3 183 aa13.13□□□□□ -0.31
RAB1A-201ENST00000398529 PRDM7Q9NQW5 492 aa13.13□□□□□ -0.31
RAB1A-201ENST00000398529 TRPS1Q9UHF7 1281 aa13.13□□□□□ -0.31
RAB1A-201ENST00000398529 ZNF225Q9UK10 706 aa13.13□□□□□ -0.31
RAB1A-201ENST00000398529 EIF3LQ9Y262 564 aaKnown RBP13.13□□□□□ -0.31
RAB1A-201ENST00000398529 FBN3Q75N90 2809 aa13.12□□□□□ -0.31
RAB1A-201ENST00000398529 JMJD1CQ15652 2540 aa13.12□□□□□ -0.31
RAB1A-201ENST00000398529 H0YIV9 168 aa13.12□□□□□ -0.31
RAB1A-201ENST00000398529 UBFD1O14562 309 aaKnown RBP13.12□□□□□ -0.31
RAB1A-201ENST00000398529 ZNF354AO60765 605 aaPredicted RBP13.12□□□□□ -0.31
RAB1A-201ENST00000398529 ERN1O75460 977 aaKnown RBP13.12□□□□□ -0.31
RAB1A-201ENST00000398529 ESRRBO95718 433 aa13.12□□□□□ -0.31
RAB1A-201ENST00000398529 GRK2P25098 689 aa13.12□□□□□ -0.31
RAB1A-201ENST00000398529 SERPINB5P36952 375 aa13.12□□□□□ -0.31
RAB1A-201ENST00000398529 MASP1P48740 699 aa13.12□□□□□ -0.31
RAB1A-201ENST00000398529 RPP38P78345 283 aaKnown RBP13.12□□□□□ -0.31
RAB1A-201ENST00000398529 STX3Q13277 289 aa13.12□□□□□ -0.31
RAB1A-201ENST00000398529 RCAN2Q14206 197 aa13.12□□□□□ -0.31
RAB1A-201ENST00000398529 CPSF6Q16630 551 aaKnown RBP eCLIP13.12□□□□□ -0.31
RAB1A-201ENST00000398529 TMEM35AQ53FP2 167 aa13.12□□□□□ -0.31
RAB1A-201ENST00000398529 SEM1Q6ZVN7 128 aa13.12□□□□□ -0.31
RAB1A-201ENST00000398529 TRIM42Q8IWZ5 723 aa13.12□□□□□ -0.31
RAB1A-201ENST00000398529 LAS2Q8IYD9 372 aa13.12□□□□□ -0.31
RAB1A-201ENST00000398529 ACOT4Q8N9L9 421 aa13.12□□□□□ -0.31
RAB1A-201ENST00000398529 NAXEQ8NCW5 288 aa13.12□□□□□ -0.31
RAB1A-201ENST00000398529 OR10G3Q8NGC4 313 aa13.12□□□□□ -0.31
RAB1A-201ENST00000398529 DIO2Q92813 273 aa13.12□□□□□ -0.31
RAB1A-201ENST00000398529 TRIB1Q96RU8 372 aa13.12□□□□□ -0.31
RAB1A-201ENST00000398529 TIMP4Q99727 224 aa13.12□□□□□ -0.31
RAB1A-201ENST00000398529 MAPKAP1Q9BPZ7 522 aa13.12□□□□□ -0.31
RAB1A-201ENST00000398529 PELOQ9BRX2 385 aaKnown RBP13.12□□□□□ -0.31
RAB1A-201ENST00000398529 CENPKQ9BS16 269 aa13.12□□□□□ -0.31
RAB1A-201ENST00000398529 SHCBP1LQ9BZQ2 653 aa13.12□□□□□ -0.31
RAB1A-201ENST00000398529 PLEKHF2Q9H8W4 249 aa13.12□□□□□ -0.31
RAB1A-201ENST00000398529 INTS9Q9NV88 658 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms