RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 MUS81Q96NY9 551 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 OR51B5Q9H339 312 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 CAAP1Q9H8G2 361 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 POLR1BQ9H9Y6 1135 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 PLEKHM1Q9Y4G2 1056 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 OR1F1O43749 312 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 GPRIN2O60269 458 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 UGT2B17O75795 530 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 CSPG5O95196 566 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 BCL6P41182 706 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 CLK1P49759 484 aaKnown RBP5.52□□□□□ -1.53
PTPRD-206ENST00000397617 CCSMST1Q4G0I0 132 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 SGO1Q5FBB7 561 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 SLC27A4Q6P1M0 643 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 WDR74Q6RFH5 385 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-206ENST00000397617 KRTCAP2Q8N6L1 136 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 DIO2Q92813 273 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 MUL1Q969V5 352 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 TAMM41Q96BW9 452 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 GIMAP5Q96F15 307 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 LOXL4Q96JB6 756 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 SEPHS2Q99611 448 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 LMF2Q9BU23 707 aaKnown RBP5.52□□□□□ -1.53
PTPRD-206ENST00000397617 NCOR2Q9Y618 2525 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 SH3PXD2BA1X283 911 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 SLC35F4A4IF30 521 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 MBTPS2O43462 519 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 MTX2O75431 263 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 TCN1P20061 433 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-206ENST00000397617 CA5AP35218 305 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 SLC15A1P46059 708 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 ARHGAP11BQ3KRB8 267 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 PAMR1Q6UXH9 720 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 ZNF786Q8N393 782 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 TTC29Q8NA56 475 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-206ENST00000397617 SPPL2AQ8TCT8 520 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 TMEM19Q96HH6 336 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 SECISBP2Q96T21 854 aaKnown RBP5.52□□□□□ -1.53
PTPRD-206ENST00000397617 TMEM43Q9BTV4 400 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 GIMAP2Q9UG22 337 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 ETV2O00321 342 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-206ENST00000397617 DNPH1O43598 174 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 TMED10P49755 219 aaKnown RBP5.52□□□□□ -1.53
PTPRD-206ENST00000397617 CRISP1P54107 249 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 FUT7Q11130 342 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 DECR1Q16698 335 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 TMEM81Q6P7N7 255 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 RHOUQ7L0Q8 258 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 C12orf76Q8N812 135 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-206ENST00000397617 DCBLD1Q8N8Z6 715 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 FEVQ99581 238 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 ARHGDIGQ99819 225 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 DIABLOQ9NR28 239 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 ZNF275Q9NSD4 429 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-206ENST00000397617 PISDQ9UG56 409 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 PAIP2BQ9ULR5 123 aaKnown RBP5.52□□□□□ -1.53
PTPRD-206ENST00000397617 NPFFR2Q9Y5X5 522 aa5.52□□□□□ -1.53
PTPRD-206ENST00000397617 TRAPPC13A5PLN9 417 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 TMEM229AB2RXF0 380 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 AXIN1O15169 862 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 TMPRSS11DO60235 418 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 NAT2P11245 290 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 IRF3Q14653 427 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 SYT16Q17RD7 645 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 ANKRD53Q8N9V6 530 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 OR4A15Q8NGL6 344 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 SLC7A13Q8TCU3 470 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 UTP15Q8TED0 518 aaKnown RBP5.51□□□□□ -1.53
PTPRD-206ENST00000397617 TP53INP1Q96A56 240 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 AMBRA1Q9C0C7 1298 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 NKX2-4Q9H2Z4 354 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 GLIPR2Q9H4G4 154 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 FGF20Q9NP95 211 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-206ENST00000397617 PSORS1C1Q9UIG5 152 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 WDR45Q9Y484 360 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 PTGDR2Q9Y5Y4 395 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 AP3D1O14617 1153 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 KLF8O95600 359 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-206ENST00000397617 NR2F1P10589 423 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 CHI3L1P36222 383 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-206ENST00000397617 SLC6A8P48029 635 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 FGL2Q14314 439 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 KCTD19Q17RG1 926 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-206ENST00000397617 CRTC3Q6UUV7 619 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 DNAJC14Q6Y2X3 702 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-206ENST00000397617 GALNT12Q8IXK2 581 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 SPARTQ8N0X7 666 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 MS4A15Q8N5U1 240 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 FLVCR1-AS1Q8TAF5 88 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 GANCQ8TET4 914 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 CNRIP1Q96F85 164 aaPredicted RBP5.51□□□□□ -1.53
PTPRD-206ENST00000397617 SLC46A1Q96NT5 459 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 OR2A14Q96R47 310 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 CXorf36Q9H7Y0 433 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 LHX9Q9NQ69 397 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 FARSBQ9NSD9 589 aaKnown RBP5.51□□□□□ -1.53
PTPRD-206ENST00000397617 ASB6Q9NWX5 421 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 GMEB2Q9UKD1 530 aa5.51□□□□□ -1.53
PTPRD-206ENST00000397617 ABCA4P78363 2273 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms