RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 SPACA6W5XKT8 324 aa13.98□□□□□ -0.17
CAPN3-207ENST00000397200 C9orf172C9J069 976 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 GNGT2O14610 69 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 CHST10O43529 356 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 CLIC3O95833 236 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 ATXN8OSP0DMR3 200 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 ETFAP13804 333 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 FBLP22087 321 aaKnown RBP13.97□□□□□ -0.17
CAPN3-207ENST00000397200 UQCRC2P22695 453 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 CPN2P22792 545 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 PCBP4P57723 403 aaKnown RBP13.97□□□□□ -0.17
CAPN3-207ENST00000397200 KCNJ10P78508 379 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 VLDLRP98155 873 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 DSG2Q14126 1118 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 HEPACAMQ14CZ8 416 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 COX20Q5RI15 118 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 ARHGAP40Q5TG30 622 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 TTC23Q5W5X9 447 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 OFCC1Q8IZS5 231 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 HS3ST5Q8IZT8 346 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 MMP21Q8N119 569 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 CA13Q8N1Q1 262 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 ZNF786Q8N393 782 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 PSMA8Q8TAA3 256 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 OR5P2Q8WZ92 322 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 C7orf34Q96L11 122 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 TSC22D3Q99576 134 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 FAIM2Q9BWQ8 316 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 TOR3AQ9H497 397 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 SOX17Q9H6I2 414 aaPredicted RBP13.97□□□□□ -0.17
CAPN3-207ENST00000397200 SMURF2Q9HAU4 748 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 MS4A12Q9NXJ0 267 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 TAS2R7Q9NYW3 318 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 PADI2Q9Y2J8 665 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 TMEM184BQ9Y519 407 aaPredicted RBP13.97□□□□□ -0.17
CAPN3-207ENST00000397200 ASB4Q9Y574 426 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 FER1L5A0AVI2 2057 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 A0A087WXM4 84 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 DNAJB6O75190 326 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 STK17BO94768 372 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 OR6B1O95007 311 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 KRT75O95678 551 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 KLK3P07288 261 aaPredicted RBP13.97□□□□□ -0.17
CAPN3-207ENST00000397200 FESP07332 822 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 ARAFP10398 606 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 ITGAMP11215 1152 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 RNH1P13489 461 aaKnown RBP13.97□□□□□ -0.17
CAPN3-207ENST00000397200 AGXTP21549 392 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 RBMS1P29558 406 aaKnown RBP13.97□□□□□ -0.17
CAPN3-207ENST00000397200 RORAP35398 523 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 BUD31P41223 144 aaPredicted RBP13.97□□□□□ -0.17
CAPN3-207ENST00000397200 RAB38P57729 211 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 DCDP81605 110 aaKnown RBP13.97□□□□□ -0.17
CAPN3-207ENST00000397200 MAT1AQ00266 395 aaKnown RBP13.97□□□□□ -0.17
CAPN3-207ENST00000397200 FOXC1Q12948 553 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 MLC1Q15049 377 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 SAXO2Q658L1 398 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 VTCN1Q7Z7D3 282 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 GALNT10Q86SR1 603 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 SLC30A8Q8IWU4 369 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 OR10Q1Q8NGQ4 319 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.97□□□□□ -0.17
CAPN3-207ENST00000397200 DGCR14Q96DF8 476 aaKnown RBP13.97□□□□□ -0.17
CAPN3-207ENST00000397200 LRFN5Q96NI6 719 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 YIPF2Q9BWQ6 316 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 AMBRA1Q9C0C7 1298 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 B3GNT4Q9C0J1 378 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 CXorf36Q9H7Y0 433 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 NEUROD4Q9HD90 331 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 SLAMF7Q9NQ25 335 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 FAM118AQ9NWS6 357 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 TEX10Q9NXF1 929 aaPredicted RBP13.97□□□□□ -0.17
CAPN3-207ENST00000397200 EHD3Q9NZN3 535 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 C3orf18Q9UK00 162 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 ATG4BQ9Y4P1 393 aa13.97□□□□□ -0.17
CAPN3-207ENST00000397200 SEC16AO15027 2179 aa13.96□□□□□ -0.17
CAPN3-207ENST00000397200 MEN1O00255 615 aa13.96□□□□□ -0.17
CAPN3-207ENST00000397200 SLC16A6O15403 523 aa13.96□□□□□ -0.17
CAPN3-207ENST00000397200 PROM1O43490 865 aa13.96□□□□□ -0.17
CAPN3-207ENST00000397200 FPR1P21462 350 aa13.96□□□□□ -0.17
CAPN3-207ENST00000397200 TLX1P31314 330 aaPredicted RBP13.96□□□□□ -0.17
CAPN3-207ENST00000397200 DNAJA1P31689 397 aaKnown RBP13.96□□□□□ -0.17
CAPN3-207ENST00000397200 PCBP3P57721 371 aaKnown RBP13.96□□□□□ -0.17
CAPN3-207ENST00000397200 SHC2P98077 582 aa13.96□□□□□ -0.17
CAPN3-207ENST00000397200 TNFRSF17Q02223 184 aa13.96□□□□□ -0.17
CAPN3-207ENST00000397200 SYT16Q17RD7 645 aa13.96□□□□□ -0.17
CAPN3-207ENST00000397200 ZNF630Q2M218 657 aaPredicted RBP13.96□□□□□ -0.17
CAPN3-207ENST00000397200 NKAIN1Q4KMZ8 207 aa13.96□□□□□ -0.17
CAPN3-207ENST00000397200 NDUFAF5Q5TEU4 345 aa13.96□□□□□ -0.17
CAPN3-207ENST00000397200 ZNF385CQ66K41 422 aaPredicted RBP13.96□□□□□ -0.17
CAPN3-207ENST00000397200 OR51Q1Q8NH59 317 aa13.96□□□□□ -0.17
CAPN3-207ENST00000397200 ADAMTS18Q8TE60 1221 aa13.96□□□□□ -0.17
CAPN3-207ENST00000397200 MAL2Q969L2 176 aa13.96□□□□□ -0.17
CAPN3-207ENST00000397200 NEURL3Q96EH8 262 aa13.96□□□□□ -0.17
CAPN3-207ENST00000397200 PEX11GQ96HA9 241 aa13.96□□□□□ -0.17
CAPN3-207ENST00000397200 DOHHQ9BU89 302 aa13.96□□□□□ -0.17
CAPN3-207ENST00000397200 ADPRHL2Q9NX46 363 aa13.96□□□□□ -0.17
CAPN3-207ENST00000397200 KCMF1Q9P0J7 381 aa13.96□□□□□ -0.17
CAPN3-207ENST00000397200 FOXJ2Q9P0K8 574 aa13.96□□□□□ -0.17
CAPN3-207ENST00000397200 TRPC4Q9UBN4 977 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms