RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 RPUSD3Q6P087 351 aaKnown RBP15.29■□□□□ 0.04
CXCL1-201ENST00000395761 CYP4Z2PQ8N1L4 340 aa15.29■□□□□ 0.04
CXCL1-201ENST00000395761 HORMAD2Q8N7B1 307 aa15.29■□□□□ 0.04
CXCL1-201ENST00000395761 TP53INP1Q96A56 240 aa15.29■□□□□ 0.04
CXCL1-201ENST00000395761 ELP4Q96EB1 424 aa15.29■□□□□ 0.04
CXCL1-201ENST00000395761 MAGED4Q96JG8 741 aa15.29■□□□□ 0.04
CXCL1-201ENST00000395761 C5orf34Q96MH7 638 aa15.29■□□□□ 0.04
CXCL1-201ENST00000395761 ITPAQ9BY32 194 aa15.29■□□□□ 0.04
CXCL1-201ENST00000395761 ASF1BQ9NVP2 202 aa15.29■□□□□ 0.04
CXCL1-201ENST00000395761 HPF1Q9NWY4 346 aa15.29■□□□□ 0.04
CXCL1-201ENST00000395761 MAP10Q9P2G4 905 aa15.29■□□□□ 0.04
CXCL1-201ENST00000395761 ERVK-11Q9UQG0 969 aa15.29■□□□□ 0.04
CXCL1-201ENST00000395761 COPG1Q9Y678 874 aaKnown RBP15.29■□□□□ 0.04
CXCL1-201ENST00000395761 PRRC2CQ9Y520 2896 aaKnown RBP15.28■□□□□ 0.04
CXCL1-201ENST00000395761 UPK1AO00322 258 aa15.28■□□□□ 0.04
CXCL1-201ENST00000395761 PLOD2O00469 737 aa15.28■□□□□ 0.04
CXCL1-201ENST00000395761 RPL3P39023 403 aaKnown RBP15.28■□□□□ 0.04
CXCL1-201ENST00000395761 MANFP55145 182 aaKnown RBP15.28■□□□□ 0.04
CXCL1-201ENST00000395761 NME5P56597 212 aa15.28■□□□□ 0.04
CXCL1-201ENST00000395761 C21orf58P58505 322 aa15.28■□□□□ 0.04
CXCL1-201ENST00000395761 PMP22Q01453 160 aa15.28■□□□□ 0.04
CXCL1-201ENST00000395761 ZNF791Q3KP31 576 aaPredicted RBP15.28■□□□□ 0.04
CXCL1-201ENST00000395761 TMEM198Q66K66 360 aa15.28■□□□□ 0.04
CXCL1-201ENST00000395761 OPN5Q6U736 354 aa15.28■□□□□ 0.04
CXCL1-201ENST00000395761 GALNTL5Q7Z4T8 443 aa15.28■□□□□ 0.04
CXCL1-201ENST00000395761 SLC15A4Q8N697 577 aa15.28■□□□□ 0.04
CXCL1-201ENST00000395761 ANKS4BQ8N8V4 417 aa15.28■□□□□ 0.04
CXCL1-201ENST00000395761 SLC22A8Q8TCC7 542 aa15.28■□□□□ 0.04
CXCL1-201ENST00000395761 GRHL3Q8TE85 626 aa15.28■□□□□ 0.04
CXCL1-201ENST00000395761 COQ8BQ96D53 544 aa15.28■□□□□ 0.04
CXCL1-201ENST00000395761 ERP27Q96DN0 273 aa15.28■□□□□ 0.04
CXCL1-201ENST00000395761 ZBED6CLQ96FA7 236 aaPredicted RBP15.28■□□□□ 0.04
CXCL1-201ENST00000395761 RILPQ96NA2 401 aa15.28■□□□□ 0.04
CXCL1-201ENST00000395761 NXF5Q9H1B4 397 aaKnown RBP15.28■□□□□ 0.04
CXCL1-201ENST00000395761 ACSS1Q9NUB1 689 aaPredicted RBP15.28■□□□□ 0.04
CXCL1-201ENST00000395761 PRODH2Q9UF12 536 aa15.28■□□□□ 0.04
CXCL1-201ENST00000395761 C19orf53Q9UNZ5 99 aaPredicted RBP15.28■□□□□ 0.04
CXCL1-201ENST00000395761 CFL2Q9Y281 166 aa15.28■□□□□ 0.04
CXCL1-201ENST00000395761 A0A087WV62 115 aa15.27■□□□□ 0.04
CXCL1-201ENST00000395761 UBDO15205 165 aa15.27■□□□□ 0.04
CXCL1-201ENST00000395761 NME2P1O60361 137 aa15.27■□□□□ 0.04
CXCL1-201ENST00000395761 BCAS2O75934 225 aaPredicted RBP15.27■□□□□ 0.04
CXCL1-201ENST00000395761 FBXO45P0C2W1 286 aa15.27■□□□□ 0.04
CXCL1-201ENST00000395761 NME2P22392 152 aa15.27■□□□□ 0.04
CXCL1-201ENST00000395761 MRPL19P49406 292 aaKnown RBP15.27■□□□□ 0.04
CXCL1-201ENST00000395761 CDK9P50750 372 aaKnown RBP15.27■□□□□ 0.04
CXCL1-201ENST00000395761 CBX1P83916 185 aa15.27■□□□□ 0.04
CXCL1-201ENST00000395761 NNATQ16517 81 aa15.27■□□□□ 0.04
CXCL1-201ENST00000395761 PGS1Q32NB8 556 aa15.27■□□□□ 0.04
CXCL1-201ENST00000395761 GKAP1Q5VSY0 366 aaPredicted RBP15.27■□□□□ 0.04
CXCL1-201ENST00000395761 GPALPP1Q8IXQ4 340 aa15.27■□□□□ 0.04
CXCL1-201ENST00000395761 PRR22Q8IZ63 422 aa15.27■□□□□ 0.04
CXCL1-201ENST00000395761 TAGAPQ8N103 731 aa15.27■□□□□ 0.04
CXCL1-201ENST00000395761 OR2L13Q8N349 312 aa15.27■□□□□ 0.04
CXCL1-201ENST00000395761 BCAS4Q8TDM0 211 aa15.27■□□□□ 0.04
CXCL1-201ENST00000395761 TMEM125Q96AQ2 219 aa15.27■□□□□ 0.04
CXCL1-201ENST00000395761 MIB2Q96AX9 1013 aa15.27■□□□□ 0.04
CXCL1-201ENST00000395761 TEX37Q96LM6 180 aa15.27■□□□□ 0.04
CXCL1-201ENST00000395761 DPY30Q9C005 99 aa15.27■□□□□ 0.04
CXCL1-201ENST00000395761 RABEP2Q9H5N1 569 aa15.27■□□□□ 0.04
CXCL1-201ENST00000395761 FOLH1BQ9HBA9 442 aa15.27■□□□□ 0.04
CXCL1-201ENST00000395761 TIMMDC1Q9NPL8 285 aa15.27■□□□□ 0.04
CXCL1-201ENST00000395761 AIG1Q9NVV5 245 aa15.27■□□□□ 0.04
CXCL1-201ENST00000395761 GPR55Q9Y2T6 319 aaPredicted RBP15.27■□□□□ 0.04
CXCL1-201ENST00000395761 ARL2BPQ9Y2Y0 163 aa15.27■□□□□ 0.04
CXCL1-201ENST00000395761 PCDHGB6Q9Y5F9 930 aa15.27■□□□□ 0.04
CXCL1-201ENST00000395761 GPR45Q9Y5Y3 372 aa15.27■□□□□ 0.04
CXCL1-201ENST00000395761 A0A1W2PRB8 838 aa15.26■□□□□ 0.03
CXCL1-201ENST00000395761 WISP2O76076 250 aa15.26■□□□□ 0.03
CXCL1-201ENST00000395761 SLITRK5O94991 958 aa15.26■□□□□ 0.03
CXCL1-201ENST00000395761 RASAL1O95294 804 aa15.26■□□□□ 0.03
CXCL1-201ENST00000395761 DRD5P21918 477 aa15.26■□□□□ 0.03
CXCL1-201ENST00000395761 GPC1P35052 558 aa15.26■□□□□ 0.03
CXCL1-201ENST00000395761 PPICP45877 212 aa15.26■□□□□ 0.03
CXCL1-201ENST00000395761 CORO7P57737 925 aa15.26■□□□□ 0.03
CXCL1-201ENST00000395761 UFM1P61960 85 aa15.26■□□□□ 0.03
CXCL1-201ENST00000395761 FOXK1P85037 733 aa15.26■□□□□ 0.03
CXCL1-201ENST00000395761 GSTA3Q16772 222 aa15.26■□□□□ 0.03
CXCL1-201ENST00000395761 RTL4Q6ZR62 310 aa15.26■□□□□ 0.03
CXCL1-201ENST00000395761 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.26■□□□□ 0.03
CXCL1-201ENST00000395761 SULF2Q8IWU5 870 aa15.26■□□□□ 0.03
CXCL1-201ENST00000395761 TMEM178AQ8NBL3 297 aa15.26■□□□□ 0.03
CXCL1-201ENST00000395761 PSD4Q8NDX1 1056 aa15.26■□□□□ 0.03
CXCL1-201ENST00000395761 C17orf47Q8NEP4 570 aa15.26■□□□□ 0.03
CXCL1-201ENST00000395761 ZFP28Q8NHY6 868 aa15.26■□□□□ 0.03
CXCL1-201ENST00000395761 SPACA9Q96E40 222 aaPredicted RBP15.26■□□□□ 0.03
CXCL1-201ENST00000395761 LCORQ96JN0 433 aaPredicted RBP15.26■□□□□ 0.03
CXCL1-201ENST00000395761 MARK4Q96L34 752 aa15.26■□□□□ 0.03
CXCL1-201ENST00000395761 VSTM2LQ96N03 204 aa15.26■□□□□ 0.03
CXCL1-201ENST00000395761 PRPF18Q99633 342 aaKnown RBP15.26■□□□□ 0.03
CXCL1-201ENST00000395761 BARD1Q99728 777 aaKnown RBP15.26■□□□□ 0.03
CXCL1-201ENST00000395761 DUSP26Q9BV47 211 aa15.26■□□□□ 0.03
CXCL1-201ENST00000395761 SIRT3Q9NTG7 399 aaPredicted RBP15.26■□□□□ 0.03
CXCL1-201ENST00000395761 DEPPQ9NTK1 212 aa15.26■□□□□ 0.03
CXCL1-201ENST00000395761 ATAD3AQ9NVI7 634 aa15.26■□□□□ 0.03
CXCL1-201ENST00000395761 DDX18Q9NVP1 670 aaKnown RBP15.26■□□□□ 0.03
CXCL1-201ENST00000395761 TRIM33Q9UPN9 1127 aa15.26■□□□□ 0.03
CXCL1-201ENST00000395761 NPFFR2Q9Y5X5 522 aa15.26■□□□□ 0.03
CXCL1-201ENST00000395761 C9JVG2 144 aa15.25■□□□□ 0.03
CXCL1-201ENST00000395761 E9PBE3 544 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms