RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 KCNK6Q9Y257 313 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 ANKRD36A6QL64 1941 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 FABP7O15540 132 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 APEHP13798 732 aaKnown RBP12.51□□□□□ -0.41
NFKB1-202ENST00000394820 SYN1P17600 705 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 VIPR1P32241 457 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 MTNR1AP48039 350 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 IRF3Q14653 427 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 KIAA0040Q15053 153 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 ZNF630Q2M218 657 aaPredicted RBP12.51□□□□□ -0.41
NFKB1-202ENST00000394820 PARGQ86W56 976 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 COQ8AQ8NI60 647 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 C1QTNF3Q9BXJ4 246 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 RSPH9Q9H1X1 276 aaPredicted RBP12.51□□□□□ -0.41
NFKB1-202ENST00000394820 SPHK2Q9NRA0 654 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 CCDC59Q9P031 241 aaKnown RBP12.51□□□□□ -0.41
NFKB1-202ENST00000394820 NTNG1Q9Y2I2 539 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 WDR87Q6ZQQ6 2873 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 EYSQ5T1H1 3165 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 NPIPA5A0A0B4J1W7 369 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 FAM171A2A8MVW0 826 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 NPIPA7E9PJI5 369 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 PIP5K1CO60331 668 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 RAB36O95755 333 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 NPIPA8P0DM63 369 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 GNSP15586 552 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 CD22P20273 847 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 PYCR1P32322 319 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 NAA10P41227 235 aaPredicted RBP12.51□□□□□ -0.41
NFKB1-202ENST00000394820 ARHGDIBP52566 201 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 PFN3P60673 137 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 ATXN7L3Q14CW9 347 aaPredicted RBP12.51□□□□□ -0.41
NFKB1-202ENST00000394820 PLBD1Q6P4A8 553 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 PODNL1Q6PEZ8 512 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 TOMM5Q8N4H5 51 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 OR5AR1Q8NGP9 310 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 ZNF480Q8WV37 535 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 ZFPM2Q8WW38 1151 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 MVB12BQ9H7P6 319 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 IRAK3Q9Y616 596 aa12.51□□□□□ -0.41
NFKB1-202ENST00000394820 CIB4A0PJX0 185 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 GREM1O60565 184 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 OSMP13725 252 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 JUNDP17535 347 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 RHCEP18577 417 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 PPM1AP35813 382 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 RBBP4Q09028 425 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 ZXDCQ2QGD7 858 aaPredicted RBP12.5□□□□□ -0.41
NFKB1-202ENST00000394820 TMEM107Q6UX40 140 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 FAM92BQ6ZTR7 304 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 FAM98AQ8NCA5 519 aaKnown RBP12.5□□□□□ -0.41
NFKB1-202ENST00000394820 LSM14AQ8ND56 463 aaKnown RBP12.5□□□□□ -0.41
NFKB1-202ENST00000394820 OR52N2Q8NGI0 321 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 SLC38A5Q8WUX1 472 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 AKAP1Q92667 903 aaKnown RBP eCLIP12.5□□□□□ -0.41
NFKB1-202ENST00000394820 TFGQ92734 400 aaPredicted RBP12.5□□□□□ -0.41
NFKB1-202ENST00000394820 EPYCQ99645 322 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.5□□□□□ -0.41
NFKB1-202ENST00000394820 ACER3Q9NUN7 267 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 SCN3AQ9NY46 2000 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 PRKAG2Q9UGJ0 569 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 PATJQ8NI35 1801 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 ZNF8P17098 575 aaPredicted RBP12.5□□□□□ -0.41
NFKB1-202ENST00000394820 ETV5P41161 510 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 ETV1P50549 477 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 STXBP1P61764 594 aaKnown RBP12.5□□□□□ -0.41
NFKB1-202ENST00000394820 NNATQ16517 81 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 NTRK2Q16620 822 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 SMUG1Q53HV7 270 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 SLC25A25Q6KCM7 469 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 ACSM5Q6NUN0 579 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 OR52L1Q8NGH7 329 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 SLC5A11Q8WWX8 675 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 GCDHQ92947 438 aaPredicted RBP12.5□□□□□ -0.41
NFKB1-202ENST00000394820 TESCQ96BS2 214 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 QRFPRQ96P65 431 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 PSD2Q9BQI7 771 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 CXorf36Q9H7Y0 433 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 DNMT3BQ9UBC3 853 aaKnown RBP12.5□□□□□ -0.41
NFKB1-202ENST00000394820 TMPRSS11EQ9UL52 423 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 ERVW-1Q9UQF0 538 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 CHD5Q8TDI0 1954 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 SCN2AQ99250 2005 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 HMX3A6NHT5 357 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 FAM25EA8MYX2 175 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 SOX2P48431 317 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 LGALS3BPQ08380 585 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 ZC3H14Q6PJT7 736 aaKnown RBP12.5□□□□□ -0.41
NFKB1-202ENST00000394820 UNC5DQ6UXZ4 953 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 CPOQ8IVL8 374 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 OR8K5Q8NH50 307 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 CEP76Q8TAP6 659 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 SLC7A13Q8TCU3 470 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 OR2A14Q96R47 310 aa12.5□□□□□ -0.41
NFKB1-202ENST00000394820 A0A0B4J203 849 aa12.49□□□□□ -0.41
NFKB1-202ENST00000394820 A0A1B0GVT2 93 aa12.49□□□□□ -0.41
NFKB1-202ENST00000394820 SLC35G4P0C7Q5 338 aa12.49□□□□□ -0.41
NFKB1-202ENST00000394820 KIR2DL3P43628 341 aa12.49□□□□□ -0.41
NFKB1-202ENST00000394820 SMIM11AP58511 58 aa12.49□□□□□ -0.41
NFKB1-202ENST00000394820 VEZF1Q14119 521 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms