RNA–Protein interactions for RNA: ENST00000390884.1

RNU6-258P-201, Transcript of RNA, U6 small nuclear 258, pseudogene, humanhuman

BASIC

Gene RNU6-258P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-258P-201ENST00000390884 RNASEH1O60930 286 aaKnown RBP-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 SS18L1O75177 396 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 CSDE1O75534 798 aaKnown RBP-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 SLU7O95391 586 aaKnown RBP-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 CCNE2O96020 404 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 APRTP07741 180 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 GIPP09681 153 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 OR9G9P0C7N8 305 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 INAFM2P0DMQ5 153 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 C1GALT1C1LP0DN25 315 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 NR2F1P10589 423 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 RNASE3P12724 160 aaKnown RBP-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 TBXA2RP21731 343 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 DPP4P27487 766 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 SYKP43405 635 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 SUMO3P55854 103 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 PTENP60484 403 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 RPS16P62249 146 aaKnown RBP-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 RAB1AP62820 205 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 CNTN1Q12860 1018 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 HEPACAMQ14CZ8 416 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 POLD3Q15054 466 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 PDK1Q15118 436 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 ZRSR2Q15696 482 aaKnown RBP-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 EXT1Q16394 746 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 ZNF791Q3KP31 576 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 FBXL19-AS1Q494R0 122 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 MDH1BQ5I0G3 518 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 EFCAB2Q5VUJ9 269 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 STUMQ69YW2 141 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 KRTAP26-1Q6PEX3 210 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 WDR59Q6PJI9 974 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 COX15Q7KZN9 410 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 PRPF39Q86UA1 669 aaKnown RBP-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 CCDC28AQ8IWP9 274 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 ADGRF2Q8IZF7 708 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 TMEM105Q8N8V8 129 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 ZNF740Q8NDX6 193 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 OR1J2Q8NGS2 313 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 OR13G1Q8NGZ3 307 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 OR51F2Q8NH61 342 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 ZFP90Q8TF47 636 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 HMGB4Q8WW32 186 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 ZNF707Q96C28 371 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 NMD3Q96D46 503 aaKnown RBP-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 TRIM44Q96DX7 344 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 GPA33Q99795 319 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 C1orf50Q9BV19 199 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 NAA15Q9BXJ9 866 aaKnown RBP-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 RAB34Q9BZG1 259 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 CHIAQ9BZP6 476 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 BRD8Q9H0E9 1235 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 WWP1Q9H0M0 922 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 DNTTIP1Q9H147 329 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 CDC42EP4Q9H3Q1 356 aaKnown RBP-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 DMAP1Q9NPF5 467 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 MBNL1Q9NR56 388 aaKnown RBP-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 LIN7CQ9NUP9 197 aaKnown RBP-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 THAP1Q9NVV9 213 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 BABAM2Q9NXR7 383 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 DDX56Q9NY93 547 aaKnown RBP-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 CNOT2Q9NZN8 540 aaKnown RBP-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 SERPINB13Q9UIV8 391 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 BAG5Q9UL15 447 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 FAM186AA6NE01 2351 aa-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 SPTBN1Q01082 2364 aaKnown RBP-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 ASCC3Q8N3C0 2202 aaKnown RBP-1.56□□□□□ -2.66
RNU6-258P-201ENST00000390884 PDS5BQ9NTI5 1447 aa-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 REV3LO60673 3130 aa-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 IGHV3OR16-12A0A075B7B8 117 aa-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 TMEM223A0PJW6 202 aa-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 MBLAC1A4D2B0 266 aaPredicted RBP-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 SLC38A8A6NNN8 435 aa-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 C17orf100A8MU93 164 aa-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 G3V3Y1 287 aa-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 SIVA1O15304 175 aa-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 RAD51BO15315 384 aa-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 ZNF264O43296 627 aa-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 CYTIPO60759 359 aa-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 CAND2O75155 1236 aa-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 FRAT2O75474 233 aaPredicted RBP-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 RFPL3O75679 317 aa-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 PGLSO95336 258 aa-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 CDS2O95674 445 aa-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 CXCL14O95715 111 aa-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 GSRP00390 522 aa-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 PDGFBP01127 241 aaPredicted RBP-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 BPIP17213 487 aa-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 PPP2R1AP30153 589 aa-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 AVPR2P30518 371 aa-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 EVX1P49640 407 aa-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 ARHGDIBP52566 201 aa-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 NKX2-5P52952 324 aaPredicted RBP-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 PRPS1P60891 318 aa-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 PRR3P79522 188 aaKnown RBP-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 SF3A3Q12874 501 aaKnown RBP eCLIP-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 RIPK1Q13546 671 aa-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 PPP2R5BQ15173 497 aa-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 C12orf74Q32Q52 190 aa-1.57□□□□□ -2.66
RNU6-258P-201ENST00000390884 RFX4Q33E94 735 aa-1.57□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms