RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 ADAM15Q13444 863 aa13.1□□□□□ -0.31
SDC1-202ENST00000381150 AANATQ16613 207 aa13.1□□□□□ -0.31
SDC1-202ENST00000381150 GDPGP1Q6ZNW5 385 aa13.1□□□□□ -0.31
SDC1-202ENST00000381150 FTMTQ8N4E7 242 aa13.1□□□□□ -0.31
SDC1-202ENST00000381150 OR4F15Q8NGB8 312 aa13.1□□□□□ -0.31
SDC1-202ENST00000381150 OR4C15Q8NGM1 316 aa13.1□□□□□ -0.31
SDC1-202ENST00000381150 OR8J1Q8NGP2 316 aa13.1□□□□□ -0.31
SDC1-202ENST00000381150 KAT2AQ92830 837 aa13.1□□□□□ -0.31
SDC1-202ENST00000381150 WDFY2Q96P53 400 aa13.1□□□□□ -0.31
SDC1-202ENST00000381150 SUV39H2Q9H5I1 410 aa13.1□□□□□ -0.31
SDC1-202ENST00000381150 HCN3Q9P1Z3 774 aa13.1□□□□□ -0.31
SDC1-202ENST00000381150 FTSJ1Q9UET6 329 aa13.1□□□□□ -0.31
SDC1-202ENST00000381150 ANGPT4Q9Y264 503 aa13.1□□□□□ -0.31
SDC1-202ENST00000381150 HEPACAM2A8MVW5 462 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 TMEM229AB2RXF0 380 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 CHP2O43745 196 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 HCN1O60741 890 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 CFDP00746 253 aaPredicted RBP13.09□□□□□ -0.31
SDC1-202ENST00000381150 IFNA7P01567 189 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 CTSAP10619 480 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 ANXA3P12429 323 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 ICAM2P13598 275 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 VIPR1P32241 457 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 NSG1P42857 185 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 TAS2R50P59544 299 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 HSPB3Q12988 150 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 POM121L1PQ3SYA9 428 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 ANXA8L1Q5VT79 327 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 FAM122CQ6P4D5 195 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 LIPIQ6XZB0 460 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 GET4Q7L5D6 327 aaPredicted RBP13.09□□□□□ -0.31
SDC1-202ENST00000381150 HUS1BQ8NHY5 278 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 COQ8AQ8NI60 647 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 FBXW5Q969U6 566 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 CPEB1Q9BZB8 566 aaKnown RBP13.09□□□□□ -0.31
SDC1-202ENST00000381150 CRISPLD2Q9H0B8 497 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 BRD9Q9H8M2 597 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 UBQLN2Q9UHD9 624 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 TEX13CA0A0J9YWL9 993 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 TEX51A0A1B0GUA7 166 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 M0R3H8 397 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 SIGLEC5O15389 551 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 PROM1O43490 865 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 RGS11O94810 467 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 RAF1P04049 648 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 KLK1P06870 262 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 CD22P20273 847 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 GIFP27352 417 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 WNT4P56705 351 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 SNRPD1P62314 119 aaKnown RBP13.09□□□□□ -0.31
SDC1-202ENST00000381150 SIGLEC14Q08ET2 396 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 CCSMST1Q4G0I0 132 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 IQCHQ86VS3 1027 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 XAGE5Q8WWM1 108 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 TMEM43Q9BTV4 400 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 TTTY10Q9BZA0 68 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 SAV1Q9H4B6 383 aaPredicted RBP13.09□□□□□ -0.31
SDC1-202ENST00000381150 ERVMER34-1Q9H9K5 563 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 ZDHHC3Q9NYG2 299 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 KLHL42Q9P2K6 505 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 CORO2BQ9UQ03 480 aa13.09□□□□□ -0.31
SDC1-202ENST00000381150 PRR23AA6NEV1 266 aa13.08□□□□□ -0.31
SDC1-202ENST00000381150 KDM4BO94953 1096 aa13.08□□□□□ -0.31
SDC1-202ENST00000381150 ELK1P19419 428 aa13.08□□□□□ -0.31
SDC1-202ENST00000381150 IDSP22304 550 aa13.08□□□□□ -0.31
SDC1-202ENST00000381150 PPIBP23284 216 aaKnown RBP13.08□□□□□ -0.31
SDC1-202ENST00000381150 IL32P24001 234 aa13.08□□□□□ -0.31
SDC1-202ENST00000381150 PREPP48147 710 aa13.08□□□□□ -0.31
SDC1-202ENST00000381150 ATP12AP54707 1039 aa13.08□□□□□ -0.31
SDC1-202ENST00000381150 SF3A2Q15428 464 aaKnown RBP13.08□□□□□ -0.31
SDC1-202ENST00000381150 TIGD3Q6B0B8 471 aa13.08□□□□□ -0.31
SDC1-202ENST00000381150 RAET1GQ6H3X3 334 aa13.08□□□□□ -0.31
SDC1-202ENST00000381150 ACSM5Q6NUN0 579 aa13.08□□□□□ -0.31
SDC1-202ENST00000381150 C22orf39Q6P5X5 142 aa13.08□□□□□ -0.31
SDC1-202ENST00000381150 RRM2BQ7LG56 351 aa13.08□□□□□ -0.31
SDC1-202ENST00000381150 OR11H7Q8NGC8 314 aa13.08□□□□□ -0.31
SDC1-202ENST00000381150 OR8J2Q8NGG1 315 aa13.08□□□□□ -0.31
SDC1-202ENST00000381150 ARMC5Q96C12 935 aa13.08□□□□□ -0.31
SDC1-202ENST00000381150 SLC6A18Q96N87 628 aa13.08□□□□□ -0.31
SDC1-202ENST00000381150 YIPF4Q9BSR8 244 aa13.08□□□□□ -0.31
SDC1-202ENST00000381150 THAP7Q9BT49 309 aaPredicted RBP13.08□□□□□ -0.31
SDC1-202ENST00000381150 SPNS1Q9H2V7 528 aa13.08□□□□□ -0.31
SDC1-202ENST00000381150 ASIC5Q9NY37 505 aa13.08□□□□□ -0.31
SDC1-202ENST00000381150 SEC14L3Q9UDX4 400 aa13.08□□□□□ -0.31
SDC1-202ENST00000381150 PRR23D1E9PI22 279 aaPredicted RBP13.08□□□□□ -0.32
SDC1-202ENST00000381150 M0R233 179 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 SGTAO43765 313 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 FGF18O76093 207 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 H1F0P07305 194 aaKnown RBP13.08□□□□□ -0.32
SDC1-202ENST00000381150 OR56A5P0C7T3 313 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 PRR23D2P0DMB1 279 aaPredicted RBP13.08□□□□□ -0.32
SDC1-202ENST00000381150 CTRB1P17538 263 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 XCR1P46094 333 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 MTAPQ13126 283 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 GRM7Q14831 915 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 CTRB2Q6GPI1 263 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 MZT2AQ6P582 158 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 THOC6Q86W42 341 aaKnown RBP13.08□□□□□ -0.32
SDC1-202ENST00000381150 TMEM25Q86YD3 366 aa13.08□□□□□ -0.32
SDC1-202ENST00000381150 KLBQ86Z14 1044 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms