RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 SLC25A37Q9NYZ2 338 aa17.43■□□□□ 0.38
SMN2-202ENST00000380742 PCDHB14Q9Y5E9 798 aa17.43■□□□□ 0.38
SMN2-202ENST00000380742 DSPP15924 2871 aaKnown RBP17.43■□□□□ 0.38
SMN2-202ENST00000380742 EXPH5Q8NEV8 1989 aa17.43■□□□□ 0.38
SMN2-202ENST00000380742 ACACBO00763 2458 aa17.43■□□□□ 0.38
SMN2-202ENST00000380742 MAP1BP46821 2468 aaKnown RBP17.43■□□□□ 0.38
SMN2-202ENST00000380742 TRBV5-3A0A0A0MS03 114 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 BBIP1A8MTZ0 92 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 A8MUI8 341 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 MRASO14807 208 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 COQ9O75208 318 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 ERN1O75460 977 aaKnown RBP17.42■□□□□ 0.38
SMN2-202ENST00000380742 KCNH1O95259 989 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 ANP32DO95626 131 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 PRDX6P30041 224 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 AP2B1P63010 937 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 TP53BP2Q13625 1128 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 MMEL1Q495T6 779 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 FCRLBQ6BAA4 426 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 C16orf47Q6ZP98 133 aaPredicted RBP17.42■□□□□ 0.38
SMN2-202ENST00000380742 SLC29A4Q7RTT9 530 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 C6orf120Q7Z4R8 191 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 WDR53Q7Z5U6 358 aaPredicted RBP17.42■□□□□ 0.38
SMN2-202ENST00000380742 SIRT6Q8N6T7 355 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 TRIML2Q8N7C3 387 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 OR56A1Q8NGH5 318 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 ZFP90Q8TF47 636 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 ADIPOR1Q96A54 375 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 MOAP1Q96BY2 351 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 RCN3Q96D15 328 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 CMTM5Q96DZ9 223 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 C16orf58Q96GQ5 468 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 VSTM2LQ96N03 204 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 MS4A4EQ96PG1 132 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 ITPAQ9BY32 194 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 WWTR1Q9GZV5 400 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 EQTNQ9NQ60 294 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 GPATCH2Q9NW75 528 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 VAPAQ9P0L0 249 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 PRODH2Q9UF12 536 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 CFL2Q9Y281 166 aa17.42■□□□□ 0.38
SMN2-202ENST00000380742 TNRC6AQ8NDV7 1962 aaKnown RBP17.42■□□□□ 0.38
SMN2-202ENST00000380742 C2orf92A0A1B0GVN3 265 aa17.41■□□□□ 0.38
SMN2-202ENST00000380742 MAN1A2O60476 641 aa17.41■□□□□ 0.38
SMN2-202ENST00000380742 HMGN2P05204 90 aaKnown RBP17.41■□□□□ 0.38
SMN2-202ENST00000380742 RAPSNQ13702 412 aa17.41■□□□□ 0.38
SMN2-202ENST00000380742 KRT72Q14CN4 511 aa17.41■□□□□ 0.38
SMN2-202ENST00000380742 TBR1Q16650 682 aa17.41■□□□□ 0.38
SMN2-202ENST00000380742 SAXO2Q658L1 398 aa17.41■□□□□ 0.38
SMN2-202ENST00000380742 B3GNTL1Q67FW5 361 aaPredicted RBP17.41■□□□□ 0.38
SMN2-202ENST00000380742 TCTN3Q6NUS6 607 aa17.41■□□□□ 0.38
SMN2-202ENST00000380742 MFSD12Q6NUT3 480 aa17.41■□□□□ 0.38
SMN2-202ENST00000380742 TRPM8Q7Z2W7 1104 aa17.41■□□□□ 0.38
SMN2-202ENST00000380742 DHDDSQ86SQ9 333 aa17.41■□□□□ 0.38
SMN2-202ENST00000380742 ZNF441Q8N8Z8 693 aa17.41■□□□□ 0.38
SMN2-202ENST00000380742 NUBPLQ8TB37 319 aa17.41■□□□□ 0.38
SMN2-202ENST00000380742 APOBEC4Q8WW27 367 aaKnown RBP17.41■□□□□ 0.38
SMN2-202ENST00000380742 AURKBQ96GD4 344 aaPredicted RBP17.41■□□□□ 0.38
SMN2-202ENST00000380742 GAL3ST4Q96RP7 486 aa17.41■□□□□ 0.38
SMN2-202ENST00000380742 YIPF4Q9BSR8 244 aa17.41■□□□□ 0.38
SMN2-202ENST00000380742 PRORYQ9H606 182 aa17.41■□□□□ 0.38
SMN2-202ENST00000380742 IL1RL2Q9HB29 575 aa17.41■□□□□ 0.38
SMN2-202ENST00000380742 CEACAM4O75871 244 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 CHI3L1P36222 383 aaPredicted RBP17.4■□□□□ 0.38
SMN2-202ENST00000380742 MAP3K8P41279 467 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 CASP9P55211 416 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 ZNF155Q12901 538 aaPredicted RBP17.4■□□□□ 0.38
SMN2-202ENST00000380742 NFYCQ13952 458 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 LASP1Q14847 261 aaKnown RBP17.4■□□□□ 0.38
SMN2-202ENST00000380742 EXOSC6Q5RKV6 272 aaKnown RBP17.4■□□□□ 0.38
SMN2-202ENST00000380742 BORAQ6PGQ7 559 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 RPS19BP1Q86WX3 136 aaKnown RBP17.4■□□□□ 0.38
SMN2-202ENST00000380742 ARMC10Q8N2F6 343 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 FDCSPQ8NFU4 85 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 OR5L2Q8NGL0 311 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 DNAJB8Q8NHS0 232 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 HOXB13Q92826 284 aaPredicted RBP17.4■□□□□ 0.38
SMN2-202ENST00000380742 NEURL3Q96EH8 262 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 SERHL2Q9H4I8 314 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 CDCP1Q9H5V8 836 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 TPT1P8Q9HAU6 139 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 GPR83Q9NYM4 423 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 MYOTQ9UBF9 498 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 GPR55Q9Y2T6 319 aaPredicted RBP17.4■□□□□ 0.38
SMN2-202ENST00000380742 FXYD1O00168 92 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 WWP2O00308 870 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 AIM2O14862 343 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 CBX6O95503 412 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 CT45A8P0DMV1 189 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 CT45A9P0DMV2 189 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 ACP2P11117 423 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 SOX11P35716 441 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 CPA2P48052 419 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 CORO7P57737 925 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 RPS26P62854 115 aaKnown RBP17.4■□□□□ 0.38
SMN2-202ENST00000380742 PSG6Q00889 435 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 NNATQ16517 81 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 TRMT5Q32P41 509 aaKnown RBP17.4■□□□□ 0.38
SMN2-202ENST00000380742 CT45A2Q5DJT8 189 aa17.4■□□□□ 0.38
SMN2-202ENST00000380742 HLA-DQA1Q5Y7H0 255 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms