RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 C19orf53Q9UNZ5 99 aaPredicted RBP18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 GMPPBQ9Y5P6 360 aa18.59■□□□□ 0.57
PDLIM5-205ENST00000380180 EPPINO95925 133 aa18.58■□□□□ 0.56
PDLIM5-205ENST00000380180 GIMD1P0DJR0 217 aa18.58■□□□□ 0.56
PDLIM5-205ENST00000380180 NT5EP21589 574 aa18.58■□□□□ 0.56
PDLIM5-205ENST00000380180 HOXA6P31267 233 aa18.58■□□□□ 0.56
PDLIM5-205ENST00000380180 CTSKP43235 329 aa18.58■□□□□ 0.56
PDLIM5-205ENST00000380180 DHPSP49366 369 aaPredicted RBP18.58■□□□□ 0.56
PDLIM5-205ENST00000380180 HLCSP50747 726 aa18.58■□□□□ 0.56
PDLIM5-205ENST00000380180 CHRNEQ04844 493 aa18.58■□□□□ 0.56
PDLIM5-205ENST00000380180 NDUFA9Q16795 377 aa18.58■□□□□ 0.56
PDLIM5-205ENST00000380180 COLEC12Q5KU26 742 aa18.58■□□□□ 0.56
PDLIM5-205ENST00000380180 RBM48Q5RL73 367 aaKnown RBP18.58■□□□□ 0.56
PDLIM5-205ENST00000380180 CWF19L1Q69YN2 538 aaKnown RBP18.58■□□□□ 0.56
PDLIM5-205ENST00000380180 RBM44Q6ZP01 1051 aaKnown RBP18.58■□□□□ 0.56
PDLIM5-205ENST00000380180 OR9Q2Q8NGE9 314 aa18.58■□□□□ 0.56
PDLIM5-205ENST00000380180 ZG16BQ96DA0 208 aa18.58■□□□□ 0.56
PDLIM5-205ENST00000380180 AHCYL2Q96HN2 611 aaKnown RBP18.58■□□□□ 0.56
PDLIM5-205ENST00000380180 ZNF285Q96NJ3 590 aa18.58■□□□□ 0.56
PDLIM5-205ENST00000380180 ALPK1Q96QP1 1244 aa18.58■□□□□ 0.56
PDLIM5-205ENST00000380180 NIPSNAP1Q9BPW8 284 aa18.58■□□□□ 0.56
PDLIM5-205ENST00000380180 NMNAT1Q9HAN9 279 aaPredicted RBP18.58■□□□□ 0.56
PDLIM5-205ENST00000380180 NDRG4Q9ULP0 352 aaKnown RBP18.58■□□□□ 0.56
PDLIM5-205ENST00000380180 CSNK1G3Q9Y6M4 447 aa18.58■□□□□ 0.56
PDLIM5-205ENST00000380180 CCDC163A0A0D9SF12 145 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 HYKKA2RU49 373 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 NUDT21O43809 227 aaKnown RBP18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 ZBTB11O95625 1053 aaPredicted RBP18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 AGXTP21549 392 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 CRHBPP24387 322 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 RPS6KA3P51812 740 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 IL5RAQ01344 420 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 PRICKLE4Q2TBC4 344 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 FAM214AQ32MH5 1076 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 HEPHL1Q6MZM0 1159 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 SLC35F3Q8IY50 421 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 SETD9Q8NE22 299 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 FBLIM1Q8WUP2 373 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 CDS1Q92903 461 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 TMIGD2Q96BF3 282 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 PAPOLBQ9NRJ5 636 aaKnown RBP18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 IRAK4Q9NWZ3 460 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 CALML5Q9NZT1 146 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 HCN3Q9P1Z3 774 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 SEC16AO15027 2179 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 M0R3H8 397 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 FCMRO60667 390 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 CCNB2O95067 398 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 LGI1O95970 557 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 RPP38P78345 283 aaKnown RBP18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 BNC1Q01954 994 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 CDK5R2Q13319 367 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 FAM53BQ14153 422 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 CNPY1Q3B7I2 92 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 LYSMD4Q5XG99 296 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 DGCR14Q96DF8 476 aaKnown RBP18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 GABARAPL3Q9BY60 117 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 RBCK1Q9BYM8 510 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 ADAP2Q9NPF8 381 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 HCN4Q9Y3Q4 1203 aa18.57■□□□□ 0.56
PDLIM5-205ENST00000380180 DSPPQ9NZW4 1301 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 A0A087WV62 115 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 IGHV1OR21-1A0A087WYE8 117 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 A8MVJ9 347 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 E9PQ18 207 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 PLOD3O60568 738 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 MYF5P13349 255 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 EEF1B2P24534 225 aaKnown RBP18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 PDX1P52945 283 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 SKP1P63208 163 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 ZXDAP98168 799 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 MGAT2Q10469 447 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 SRSF5Q13243 272 aaKnown RBP18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 SHBQ15464 509 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 DUSP5Q16690 384 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 TAGAPQ8N103 731 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 CNIH3Q8TBE1 160 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 PEX11GQ96HA9 241 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 CD180Q99467 661 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 ELF4Q99607 663 aaPredicted RBP18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 PSD2Q9BQI7 771 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 CHRNA10Q9GZZ6 450 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 MAT2BQ9NZL9 334 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 TRBV4-1A0A0J9YWV2 114 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 ZIC2O95409 532 aaPredicted RBP18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 AGR2O95994 175 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 CT62P0C5K7 136 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 ACP2P11117 423 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 RNH1P13489 461 aaKnown RBP18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 MAT1AQ00266 395 aaKnown RBP18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 ZNF311Q5JNZ3 666 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 PRPF38BQ5VTL8 546 aaKnown RBP18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 MLIPQ5VWP3 458 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 TSPYL5Q86VY4 417 aaPredicted RBP18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 ZNF675Q8TD23 568 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 MYCBPQ99417 103 aaPredicted RBP18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 APOL4Q9BPW4 351 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 PINK1Q9BXM7 581 aa18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 SPRTNQ9H040 489 aaPredicted RBP18.56■□□□□ 0.56
PDLIM5-205ENST00000380180 RBM38Q9H0Z9 239 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms