RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 ALDH6A1Q02252 535 aaKnown RBP20.25■□□□□ 0.83
TRIM54-202ENST00000380075 COX10Q12887 443 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 IRF3Q14653 427 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 LASP1Q14847 261 aaKnown RBP20.25■□□□□ 0.83
TRIM54-202ENST00000380075 TIGD6Q17RP2 521 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 C18orf63Q68DL7 685 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 Q6ZNX1 250 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 SLC15A4Q8N697 577 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 OR4D11Q8NGI4 311 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 LGALS12Q96DT0 336 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 SH3YL1Q96HL8 342 aaPredicted RBP20.25■□□□□ 0.83
TRIM54-202ENST00000380075 BMFQ96LC9 184 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 Q96MT0 163 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 TBCCD1Q9NVR7 557 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 MS4A12Q9NXJ0 267 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 LIPT1Q9Y234 373 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 IGHV1OR15-9A0A0B4J2B8 117 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 LRRC72A6NJI9 287 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 SYT5O00445 386 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 TOR1BO14657 336 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 SCAMP1O15126 338 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 LGI1O95970 557 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 IGLV3-19P01714 112 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 SLC35G6P0C7Q6 338 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 NR2F6P10588 404 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 AK4P27144 223 aaPredicted RBP20.25■□□□□ 0.83
TRIM54-202ENST00000380075 CNR2P34972 360 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 UGT2B10P36537 528 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 ACTR1BP42025 376 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 ACTR1AP61163 376 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 TUBA1BP68363 451 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 SEC23BQ15437 767 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 SLX4IPQ5VYV7 408 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 CD300LDQ6UXZ3 194 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 TUBA1AQ71U36 451 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 VN1R4Q7Z5H5 301 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 PRSS33Q8NF86 280 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 NDNFQ8TB73 568 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 ZNF675Q8TD23 568 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 ZFPM2Q8WW38 1151 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 PPP1R14BQ96C90 147 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 ZNF681Q96N22 645 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 CDCA4Q9BXL8 241 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 TRNAU1APQ9NX07 287 aaKnown RBP20.25■□□□□ 0.83
TRIM54-202ENST00000380075 GPR83Q9NYM4 423 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 PHF11Q9UIL8 331 aa20.25■□□□□ 0.83
TRIM54-202ENST00000380075 A6NCN8 305 aa20.24■□□□□ 0.83
TRIM54-202ENST00000380075 URADA6NGE7 173 aa20.24■□□□□ 0.83
TRIM54-202ENST00000380075 WASHC1A8K0Z3 465 aa20.24■□□□□ 0.83
TRIM54-202ENST00000380075 TNFSF14O43557 240 aa20.24■□□□□ 0.83
TRIM54-202ENST00000380075 EML2O95834 649 aa20.24■□□□□ 0.83
TRIM54-202ENST00000380075 CHRM4P08173 479 aa20.24■□□□□ 0.83
TRIM54-202ENST00000380075 BUD31P41223 144 aaPredicted RBP20.24■□□□□ 0.83
TRIM54-202ENST00000380075 VBP1P61758 197 aa20.24■□□□□ 0.83
TRIM54-202ENST00000380075 BTN3A2P78410 334 aa20.24■□□□□ 0.83
TRIM54-202ENST00000380075 ST3GAL4Q11206 333 aa20.24■□□□□ 0.83
TRIM54-202ENST00000380075 PGBD2Q6P3X8 592 aa20.24■□□□□ 0.83
TRIM54-202ENST00000380075 TMEM107Q6UX40 140 aa20.24■□□□□ 0.83
TRIM54-202ENST00000380075 ZNF367Q7RTV3 350 aa20.24■□□□□ 0.83
TRIM54-202ENST00000380075 TOE1Q96GM8 510 aaKnown RBP20.24■□□□□ 0.83
TRIM54-202ENST00000380075 PRRC1Q96M27 445 aa20.24■□□□□ 0.83
TRIM54-202ENST00000380075 FNDC11Q9BVV2 318 aa20.24■□□□□ 0.83
TRIM54-202ENST00000380075 AMBNQ9NP70 447 aa20.24■□□□□ 0.83
TRIM54-202ENST00000380075 EFCAB9A8MZ26 197 aa20.23■□□□□ 0.83
TRIM54-202ENST00000380075 TLR4O00206 839 aa20.23■□□□□ 0.83
TRIM54-202ENST00000380075 BTN3A3O00478 584 aa20.23■□□□□ 0.83
TRIM54-202ENST00000380075 HRO43593 1189 aa20.23■□□□□ 0.83
TRIM54-202ENST00000380075 CNOT3O75175 753 aaKnown RBP20.23■□□□□ 0.83
TRIM54-202ENST00000380075 STSP08842 583 aa20.23■□□□□ 0.83
TRIM54-202ENST00000380075 AKT2P31751 481 aa20.23■□□□□ 0.83
TRIM54-202ENST00000380075 NUDT6P53370 316 aa20.23■□□□□ 0.83
TRIM54-202ENST00000380075 FUT5Q11128 374 aa20.23■□□□□ 0.83
TRIM54-202ENST00000380075 TCF15Q12870 199 aa20.23■□□□□ 0.83
TRIM54-202ENST00000380075 TMED1Q13445 227 aa20.23■□□□□ 0.83
TRIM54-202ENST00000380075 SUZ12Q15022 739 aaKnown RBP20.23■□□□□ 0.83
TRIM54-202ENST00000380075 TMEM201Q5SNT2 666 aa20.23■□□□□ 0.83
TRIM54-202ENST00000380075 C12orf73Q69YU5 71 aa20.23■□□□□ 0.83
TRIM54-202ENST00000380075 ADCK1Q86TW2 530 aa20.23■□□□□ 0.83
TRIM54-202ENST00000380075 RBM45Q8IUH3 476 aaKnown RBP20.23■□□□□ 0.83
TRIM54-202ENST00000380075 ZBTB44Q8NCP5 570 aa20.23■□□□□ 0.83
TRIM54-202ENST00000380075 B3GNT7Q8NFL0 401 aa20.23■□□□□ 0.83
TRIM54-202ENST00000380075 ELP4Q96EB1 424 aa20.23■□□□□ 0.83
TRIM54-202ENST00000380075 FBXO8Q9NRD0 319 aa20.23■□□□□ 0.83
TRIM54-202ENST00000380075 GALNT8Q9NY28 637 aa20.23■□□□□ 0.83
TRIM54-202ENST00000380075 WSB2Q9NYS7 404 aaPredicted RBP20.23■□□□□ 0.83
TRIM54-202ENST00000380075 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.23■□□□□ 0.83
TRIM54-202ENST00000380075 M0R082 166 aa20.23■□□□□ 0.83
TRIM54-202ENST00000380075 NADKO95544 446 aaPredicted RBP20.23■□□□□ 0.83
TRIM54-202ENST00000380075 ADORA3P0DMS8 318 aa20.23■□□□□ 0.83
TRIM54-202ENST00000380075 FEN1P39748 380 aaKnown RBP20.23■□□□□ 0.83
TRIM54-202ENST00000380075 OPRL1P41146 370 aa20.23■□□□□ 0.83
TRIM54-202ENST00000380075 DUSP2Q05923 314 aa20.23■□□□□ 0.83
TRIM54-202ENST00000380075 ANKDD1AQ495B1 522 aa20.23■□□□□ 0.83
TRIM54-202ENST00000380075 SLC46A3Q7Z3Q1 461 aa20.23■□□□□ 0.83
TRIM54-202ENST00000380075 LACC1Q8IV20 430 aa20.23■□□□□ 0.83
TRIM54-202ENST00000380075 NUP43Q8NFH3 380 aa20.23■□□□□ 0.83
TRIM54-202ENST00000380075 SLC7A13Q8TCU3 470 aa20.23■□□□□ 0.83
TRIM54-202ENST00000380075 JPH3Q8WXH2 748 aaPredicted RBP20.23■□□□□ 0.83
TRIM54-202ENST00000380075 TSACCQ96A04 125 aaPredicted RBP20.23■□□□□ 0.83
TRIM54-202ENST00000380075 TM4SF19Q96DZ7 209 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms