RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 GTF2F2P13984 249 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 PRKCDQ05655 676 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 APOFQ13790 326 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 SLC14A2Q15849 920 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 HMBOX1Q6NT76 420 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 HS6ST2Q96MM7 605 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 CPPED1Q9BRF8 314 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-203ENST00000375274 POTEKPQ9BYX7 375 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 MTG2Q9H4K7 406 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 IL37Q9NZH6 218 aa10.97□□□□□ -0.65
PTCH1-203ENST00000375274 GPN3Q9UHW5 284 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-203ENST00000375274 NDRG2Q9UN36 371 aaKnown RBP10.97□□□□□ -0.65
PTCH1-203ENST00000375274 ALS2Q96Q42 1657 aa10.96□□□□□ -0.65
PTCH1-203ENST00000375274 TEX13CA0A0J9YWL9 993 aa10.96□□□□□ -0.65
PTCH1-203ENST00000375274 A0A1W2PQ09 198 aa10.96□□□□□ -0.65
PTCH1-203ENST00000375274 H7C2Y5 167 aa10.96□□□□□ -0.65
PTCH1-203ENST00000375274 DRD5P21918 477 aa10.96□□□□□ -0.65
PTCH1-203ENST00000375274 ADH7P40394 386 aa10.96□□□□□ -0.65
PTCH1-203ENST00000375274 CRYZQ08257 329 aaKnown RBP10.96□□□□□ -0.65
PTCH1-203ENST00000375274 BAIAP2L2Q6UXY1 529 aa10.96□□□□□ -0.65
PTCH1-203ENST00000375274 SH2D5Q6ZV89 423 aa10.96□□□□□ -0.65
PTCH1-203ENST00000375274 KLHDC8AQ8IYD2 350 aa10.96□□□□□ -0.65
PTCH1-203ENST00000375274 OR2T35Q8NGX2 323 aa10.96□□□□□ -0.65
PTCH1-203ENST00000375274 ADAMTS19Q8TE59 1207 aa10.96□□□□□ -0.65
PTCH1-203ENST00000375274 GGHQ92820 318 aa10.96□□□□□ -0.65
PTCH1-203ENST00000375274 SLC2A11Q9BYW1 496 aa10.96□□□□□ -0.65
PTCH1-203ENST00000375274 TRPM3Q9HCF6 1732 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-203ENST00000375274 PRSS21Q9Y6M0 314 aa10.96□□□□□ -0.65
PTCH1-203ENST00000375274 CROCCQ5TZA2 2017 aa10.96□□□□□ -0.65
PTCH1-203ENST00000375274 IFNA21P01568 189 aa10.96□□□□□ -0.65
PTCH1-203ENST00000375274 SSTR4P31391 388 aa10.96□□□□□ -0.65
PTCH1-203ENST00000375274 LRRC37A5PQ49AS3 106 aa10.96□□□□□ -0.65
PTCH1-203ENST00000375274 Q6ZPB1 254 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-203ENST00000375274 CPOQ8IVL8 374 aa10.96□□□□□ -0.65
PTCH1-203ENST00000375274 NRSN1Q8IZ57 195 aa10.96□□□□□ -0.65
PTCH1-203ENST00000375274 OR2T11Q8NH01 316 aa10.96□□□□□ -0.65
PTCH1-203ENST00000375274 PRRG4Q9BZD6 226 aa10.96□□□□□ -0.65
PTCH1-203ENST00000375274 POLMQ9NP87 494 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-203ENST00000375274 CNIH4Q9P003 139 aa10.96□□□□□ -0.65
PTCH1-203ENST00000375274 PCDH10Q9P2E7 1040 aa10.96□□□□□ -0.65
PTCH1-203ENST00000375274 ZNF878C9JN71 531 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 MUSKO15146 869 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 PPM1BO75688 479 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 CYB5AP00167 134 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 APOC1P02654 83 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 BMP4P12644 408 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 TYRP1P17643 537 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 HOXD9P28356 352 aaPredicted RBP10.96□□□□□ -0.66
PTCH1-203ENST00000375274 CDKN2CP42773 168 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 RNF144AP50876 292 aaPredicted RBP10.96□□□□□ -0.66
PTCH1-203ENST00000375274 RAB28P51157 221 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 ACTA2P62736 377 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 ACTG2P63267 376 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 RIPPLY1Q0D2K3 151 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 POU4F2Q12837 409 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 BCL7AQ4VC05 210 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 GLT8D1Q68CQ7 371 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 SFRP4Q6FHJ7 346 aaPredicted RBP10.96□□□□□ -0.66
PTCH1-203ENST00000375274 KCTD9Q7L273 389 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 LNX2Q8N448 690 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 OR6C4Q8NGE1 309 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 THAP4Q8WY91 577 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 KHNYNO15037 678 aaKnown RBP10.96□□□□□ -0.66
PTCH1-203ENST00000375274 SCGNO76038 276 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 HSD11B1P28845 292 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 LRIT3Q3SXY7 679 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 PRRT3Q5FWE3 981 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 GARNL3Q5VVW2 1013 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 OR5T3Q8NGG3 340 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 HMGB4Q8WW32 186 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 ASB11Q8WXH4 323 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 RBCK1Q9BYM8 510 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 CHMP1AQ9HD42 196 aaPredicted RBP10.96□□□□□ -0.66
PTCH1-203ENST00000375274 TLR9Q9NR96 1032 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 HRASLS2Q9NWW9 162 aa10.96□□□□□ -0.66
PTCH1-203ENST00000375274 DNMT3AQ9Y6K1 912 aaPredicted RBP10.96□□□□□ -0.66
PTCH1-203ENST00000375274 ZNF726A6NNF4 738 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 HOXB2P14652 356 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 PDHA2P29803 388 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 FXYD6P3P58550 94 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 RAB33AQ14088 237 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 ABCA11PQ4W5N1 156 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 FOXB2Q5VYV0 432 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 SLC22A10Q63ZE4 541 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 PYHIN1Q6K0P9 492 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 ARHGAP11AQ6P4F7 1023 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 KCTD18Q6PI47 426 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-203ENST00000375274 FIGNL1Q6PIW4 674 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 CYP4V2Q6ZWL3 525 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-203ENST00000375274 UBQLNLQ8IYU4 475 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 METTL4Q8N3J2 472 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 POGLUT1Q8NBL1 392 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 TMEM41AQ96HV5 264 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 GPR78Q96P69 363 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 OR8D2Q9GZM6 311 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 ABCG4Q9H172 646 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 DMRT3Q9NQL9 472 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 SERINC1Q9NRX5 453 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 TAS2R3Q9NYW6 316 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 FBXL3Q9UKT7 428 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms