RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 RFX3P48380 749 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 GINS1Q14691 196 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 FUNDC1Q8IVP5 155 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 ISCA1Q9BUE6 129 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 SLC2A9Q9NRM0 540 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 RYDENQ9NUL5 291 aaKnown RBP6.32□□□□□ -1.4
UBR4-204ENST00000375254 KCMF1Q9P0J7 381 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 K7ERQ8 282 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 MED6O75586 246 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 NUDT14O95848 222 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 RBP2P50120 134 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 TMEM198Q66K66 360 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 CXorf40BQ96DE9 158 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 SLC32A1Q9H598 525 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 AGO3Q9H9G7 860 aaKnown RBP6.32□□□□□ -1.4
UBR4-204ENST00000375254 ZNF275Q9NSD4 429 aaPredicted RBP6.32□□□□□ -1.4
UBR4-204ENST00000375254 USP36Q9P275 1121 aaKnown RBP6.32□□□□□ -1.4
UBR4-204ENST00000375254 PDGFBP01127 241 aaPredicted RBP6.32□□□□□ -1.4
UBR4-204ENST00000375254 UNGP13051 313 aaPredicted RBP6.32□□□□□ -1.4
UBR4-204ENST00000375254 CR2P20023 1033 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 LSSP48449 732 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 APOFQ13790 326 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 OPN5Q6U736 354 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 ALKAL2Q6UX46 152 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 B3GNT9Q6UX72 402 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 DCXRQ7Z4W1 244 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 OR5H2Q8NGV7 314 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 SUN3Q8TAQ9 357 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 TRIB2Q92519 343 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 RNF170Q96K19 258 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 HSD17B14Q9BPX1 270 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 EDEM2Q9BV94 578 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 TM6SF2Q9BZW4 377 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 DDX31Q9H8H2 851 aaKnown RBP6.32□□□□□ -1.4
UBR4-204ENST00000375254 YBEYP58557 167 aaPredicted RBP6.32□□□□□ -1.4
UBR4-204ENST00000375254 UFM1P61960 85 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 SELENBP1Q13228 472 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 BTG3Q14201 252 aaPredicted RBP6.32□□□□□ -1.4
UBR4-204ENST00000375254 ZDHHC14Q8IZN3 488 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 TMEM104Q8NE00 496 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 DAZAP1Q96EP5 407 aaKnown RBP6.32□□□□□ -1.4
UBR4-204ENST00000375254 DERL2Q9GZP9 239 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 RIMS3Q9UJD0 308 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 UMAD1C9J7I0 102 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 ALPLP05186 524 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 ATXN7L3Q14CW9 347 aaPredicted RBP6.32□□□□□ -1.4
UBR4-204ENST00000375254 ZNF467Q7Z7K2 595 aaPredicted RBP6.32□□□□□ -1.4
UBR4-204ENST00000375254 CNIH3Q8TBE1 160 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 SLC22A14Q9Y267 594 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 ADAM11O75078 769 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 SUPT20HL2P0C7V6 817 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 CPT1AP50416 773 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 DAOAP59103 153 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 MS4A2Q01362 244 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 VEZF1Q14119 521 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 MPPED2Q15777 294 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 CATSPERGQ6ZRH7 1159 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 RRAGCQ9HB90 399 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 FAM86B1E9PN63 330 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 ARNTLO00327 626 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 S1PR1P21453 382 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 RARRES1P49788 294 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 SNRPD1P62314 119 aaKnown RBP6.32□□□□□ -1.4
UBR4-204ENST00000375254 HTR4Q13639 388 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 PDE12Q6L8Q7 609 aaKnown RBP6.32□□□□□ -1.4
UBR4-204ENST00000375254 FAM86B1Q8N7N1 296 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 UTP4Q969X6 686 aaKnown RBP6.32□□□□□ -1.4
UBR4-204ENST00000375254 PIGQQ9BRB3 760 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 GPR61Q9BZJ8 451 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 BEX1Q9HBH7 125 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 ZNF286AQ9HBT8 521 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 AGO4Q9HCK5 861 aaKnown RBP6.32□□□□□ -1.4
UBR4-204ENST00000375254 ACKR4Q9NPB9 350 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 TCRBV7S2A1N4TA0A589 114 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 GPRIN2O60269 458 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 SCGB1D2O95969 90 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 HMGCS2P54868 508 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 TAS2R46P59540 309 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 PRR27Q6MZM9 219 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 SLC29A4Q7RTT9 530 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 NPAS4Q8IUM7 802 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 RAVER1Q8IY67 606 aaKnown RBP6.32□□□□□ -1.4
UBR4-204ENST00000375254 TRMT10AQ8TBZ6 339 aaKnown RBP6.32□□□□□ -1.4
UBR4-204ENST00000375254 SLC25A46Q96AG3 418 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 ZNF599Q96NL3 588 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 MFSD1Q9H3U5 465 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 M0R3H8 397 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 AGPAT2O15120 278 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 ASGR1P07306 291 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 HNRNPA3P51991 378 aaKnown RBP6.32□□□□□ -1.4
UBR4-204ENST00000375254 DNAJC5GQ8N7S2 189 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 RERGQ96A58 199 aaPredicted RBP6.32□□□□□ -1.4
UBR4-204ENST00000375254 NUDT9Q9BW91 350 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 MED17Q9NVC6 651 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 A0A0B4J203 849 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 HPGDSO60760 199 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 AKR1C4P17516 323 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 PYCR1P32322 319 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 TPPP2P59282 170 aa6.32□□□□□ -1.4
UBR4-204ENST00000375254 SSBP1Q04837 148 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms