RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 PIGGQ5H8A4 983 aa13.9□□□□□ -0.18
HSPG2-201ENST00000374673 HLA-DQA1Q5Y7H0 255 aa13.9□□□□□ -0.18
HSPG2-201ENST00000374673 ASB18Q6ZVZ8 466 aa13.9□□□□□ -0.18
HSPG2-201ENST00000374673 ANKRD46Q86W74 232 aa13.9□□□□□ -0.18
HSPG2-201ENST00000374673 SLC15A4Q8N697 577 aa13.9□□□□□ -0.18
HSPG2-201ENST00000374673 NUP43Q8NFH3 380 aa13.9□□□□□ -0.18
HSPG2-201ENST00000374673 OR4A15Q8NGL6 344 aa13.9□□□□□ -0.18
HSPG2-201ENST00000374673 GOT1L1Q8NHS2 421 aaPredicted RBP13.9□□□□□ -0.18
HSPG2-201ENST00000374673 HAS2Q92819 552 aa13.9□□□□□ -0.18
HSPG2-201ENST00000374673 GIMAP5Q96F15 307 aa13.9□□□□□ -0.18
HSPG2-201ENST00000374673 MAGED4Q96JG8 741 aa13.9□□□□□ -0.18
HSPG2-201ENST00000374673 VSTM2LQ96N03 204 aa13.9□□□□□ -0.18
HSPG2-201ENST00000374673 MS4A4EQ96PG1 132 aa13.9□□□□□ -0.18
HSPG2-201ENST00000374673 RASL10BQ96S79 203 aa13.9□□□□□ -0.18
HSPG2-201ENST00000374673 FOLH1BQ9HBA9 442 aa13.9□□□□□ -0.18
HSPG2-201ENST00000374673 SLC52A3Q9NQ40 469 aa13.9□□□□□ -0.18
HSPG2-201ENST00000374673 SAR1AQ9NR31 198 aa13.9□□□□□ -0.18
HSPG2-201ENST00000374673 ERVK-11Q9UQG0 969 aa13.9□□□□□ -0.18
HSPG2-201ENST00000374673 KMT2BQ9UMN6 2715 aaPredicted RBP13.89□□□□□ -0.19
HSPG2-201ENST00000374673 CCDC154A6NI56 674 aa13.89□□□□□ -0.19
HSPG2-201ENST00000374673 OR2J2O76002 312 aa13.89□□□□□ -0.19
HSPG2-201ENST00000374673 NADKO95544 446 aaPredicted RBP13.89□□□□□ -0.19
HSPG2-201ENST00000374673 CPSF4O95639 269 aaKnown RBP13.89□□□□□ -0.19
HSPG2-201ENST00000374673 WDPCPO95876 746 aa13.89□□□□□ -0.19
HSPG2-201ENST00000374673 DRD5P21918 477 aa13.89□□□□□ -0.19
HSPG2-201ENST00000374673 ADSLP30566 484 aaPredicted RBP13.89□□□□□ -0.19
HSPG2-201ENST00000374673 PPICP45877 212 aa13.89□□□□□ -0.19
HSPG2-201ENST00000374673 CCT3P49368 545 aaKnown RBP13.89□□□□□ -0.19
HSPG2-201ENST00000374673 SSR4P51571 173 aa13.89□□□□□ -0.19
HSPG2-201ENST00000374673 TIGD2Q4W5G0 525 aa13.89□□□□□ -0.19
HSPG2-201ENST00000374673 C16orf47Q6ZP98 133 aaPredicted RBP13.89□□□□□ -0.19
HSPG2-201ENST00000374673 PIGWQ7Z7B1 504 aa13.89□□□□□ -0.19
HSPG2-201ENST00000374673 ZADH2Q8N4Q0 377 aa13.89□□□□□ -0.19
HSPG2-201ENST00000374673 OR56A1Q8NGH5 318 aa13.89□□□□□ -0.19
HSPG2-201ENST00000374673 SLC22A8Q8TCC7 542 aa13.89□□□□□ -0.19
HSPG2-201ENST00000374673 TSPEARQ8WU66 669 aa13.89□□□□□ -0.19
HSPG2-201ENST00000374673 HOXB13Q92826 284 aaPredicted RBP13.89□□□□□ -0.19
HSPG2-201ENST00000374673 SPDL1Q96EA4 605 aa13.89□□□□□ -0.19
HSPG2-201ENST00000374673 LCORQ96JN0 433 aaPredicted RBP13.89□□□□□ -0.19
HSPG2-201ENST00000374673 BTBD9Q96Q07 612 aa13.89□□□□□ -0.19
HSPG2-201ENST00000374673 LMF2Q9BU23 707 aaKnown RBP13.89□□□□□ -0.19
HSPG2-201ENST00000374673 NXF5Q9H1B4 397 aaKnown RBP13.89□□□□□ -0.19
HSPG2-201ENST00000374673 RMND5AQ9H871 391 aa13.89□□□□□ -0.19
HSPG2-201ENST00000374673 TRIM45Q9H8W5 580 aaPredicted RBP13.89□□□□□ -0.19
HSPG2-201ENST00000374673 SERHLQ9NQF3 203 aa13.89□□□□□ -0.19
HSPG2-201ENST00000374673 ZNF71Q9NQZ8 489 aaPredicted RBP13.89□□□□□ -0.19
HSPG2-201ENST00000374673 ZCCHC3Q9NUD5 404 aaKnown RBP13.89□□□□□ -0.19
HSPG2-201ENST00000374673 GPR55Q9Y2T6 319 aaPredicted RBP13.89□□□□□ -0.19
HSPG2-201ENST00000374673 SNX8Q9Y5X2 465 aa13.89□□□□□ -0.19
HSPG2-201ENST00000374673 OR5H15A6NDH6 313 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 FRG2CA6NGY1 282 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 TTC36A6NLP5 189 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 NR5A2O00482 541 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 TO15178 435 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 ACOX3O15254 700 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 ZNF354AO60765 605 aaPredicted RBP13.88□□□□□ -0.19
HSPG2-201ENST00000374673 ERN1O75460 977 aaKnown RBP13.88□□□□□ -0.19
HSPG2-201ENST00000374673 CAPN3P20807 821 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 UQCRC2P22695 453 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 SOAT1P35610 550 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 CASRP41180 1078 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 CD97P48960 835 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 HLCSP50747 726 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 NR0B1P51843 470 aaKnown RBP13.88□□□□□ -0.19
HSPG2-201ENST00000374673 PSPHP78330 225 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 ARG2P78540 354 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 PSG6Q00889 435 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 ZNF155Q12901 538 aaPredicted RBP13.88□□□□□ -0.19
HSPG2-201ENST00000374673 TUBA3CQ13748 450 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 MAPKAPK3Q16644 382 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 ZCCHC12Q6PEW1 402 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 TUBA3EQ6PEY2 450 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 LYPD8Q6UX82 237 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 GK5Q6ZS86 529 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 SZRD1Q7Z422 152 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 GPALPP1Q8IXQ4 340 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 TAGAPQ8N103 731 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 TMEM156Q8N614 296 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 RBMXL3Q8N7X1 1067 aaKnown RBP13.88□□□□□ -0.19
HSPG2-201ENST00000374673 VPS33AQ96AX1 596 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 HSPBAP1Q96EW2 488 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 ITCHQ96J02 903 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 PANX1Q96RD7 426 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 UTP23Q9BRU9 249 aaKnown RBP13.88□□□□□ -0.19
HSPG2-201ENST00000374673 NMUR2Q9GZQ4 415 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 PLA2G3Q9NZ20 509 aa13.88□□□□□ -0.19
HSPG2-201ENST00000374673 EPG5Q9HCE0 2579 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 DSPP15924 2871 aaKnown RBP13.87□□□□□ -0.19
HSPG2-201ENST00000374673 RNF103-CHMP3A0A140T963 221 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 A0A1W2PP18 115 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 ASPDHA6ND91 283 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 RFXANKO14593 260 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 SLC22A2O15244 555 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 CCDC22O60826 627 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 NME6O75414 186 aaPredicted RBP13.87□□□□□ -0.19
HSPG2-201ENST00000374673 FAM107AO95990 144 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 CT45A8P0DMV1 189 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 CT45A9P0DMV2 189 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 CD1EP15812 388 aa13.87□□□□□ -0.19
HSPG2-201ENST00000374673 CD96P40200 585 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms