RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 OR5D16Q8NGK9 328 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 NEIL3Q8TAT5 605 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 XAGE5Q8WWM1 108 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 ZC3HAV1LQ96H79 300 aaKnown RBP12.93□□□□□ -0.34
USP49-201ENST00000373006 MED18Q9BUE0 208 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 SLC28A3Q9HAS3 691 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 KCNK12Q9HB15 430 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 MYNNQ9NPC7 610 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 A4GNTQ9UNA3 340 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 CDH10Q9Y6N8 788 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 CASP8AP2Q9UKL3 1982 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 PITPNM1O00562 1244 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 AKAP8O43823 692 aaKnown RBP12.93□□□□□ -0.34
USP49-201ENST00000373006 SLC28A2O43868 658 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 LIMS3P0CW19 117 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 LIMS4P0CW20 117 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 TPBGQ13641 420 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 FCN2Q15485 313 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 KLHL22Q53GT1 634 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 BCL2L15Q5TBC7 163 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 IDO2Q6ZQW0 420 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 FAM92BQ6ZTR7 304 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 C6orf120Q7Z4R8 191 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 C9orf62Q8N4C0 152 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 OR4F15Q8NGB8 312 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 ZNF354BQ96LW1 612 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 NRTNQ99748 197 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 SOSTQ9BQB4 213 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 FNDC11Q9BVV2 318 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 SMG9Q9H0W8 520 aaKnown RBP12.93□□□□□ -0.34
USP49-201ENST00000373006 ZNF334Q9HCZ1 680 aaPredicted RBP12.93□□□□□ -0.34
USP49-201ENST00000373006 DOCK6Q96HP0 2047 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 MYO10Q9HD67 2058 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 TRAV6A0A075B6T7 132 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 A0A0A6YYJ9 748 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 STK25O00506 426 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 SOD1P00441 154 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 HLA-DQB1P01920 261 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 URODP06132 367 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 CKMP06732 381 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 C1GALT1C1LP0DN25 315 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 GABRA5P31644 462 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 MTNR1AP48039 350 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 KCNJ5P48544 419 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 RNLSQ5VYX0 342 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 TMEM220Q6QAJ8 160 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 IL20RBQ6UXL0 311 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 TMCO2Q7Z6W1 182 aaPredicted RBP12.93□□□□□ -0.34
USP49-201ENST00000373006 RASGRP3Q8IV61 690 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 ZBTB44Q8NCP5 570 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 ZNF461Q8TAF7 563 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 SCLYQ96I15 445 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 FOPNLQ96NB1 174 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 CFAP97Q9P2B7 532 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 ZNF222Q9UK12 451 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 DYRK1BQ9Y463 629 aa12.93□□□□□ -0.34
USP49-201ENST00000373006 CDH23Q9H251 3354 aa12.92□□□□□ -0.34
USP49-201ENST00000373006 GSAPA4D1B5 854 aa12.92□□□□□ -0.34
USP49-201ENST00000373006 HMGN4O00479 90 aa12.92□□□□□ -0.34
USP49-201ENST00000373006 SLC43A1O75387 559 aa12.92□□□□□ -0.34
USP49-201ENST00000373006 TOXO94900 526 aa12.92□□□□□ -0.34
USP49-201ENST00000373006 ELK1P19419 428 aa12.92□□□□□ -0.34
USP49-201ENST00000373006 HLA-FP30511 346 aa12.92□□□□□ -0.34
USP49-201ENST00000373006 FGFBP1Q14512 234 aa12.92□□□□□ -0.34
USP49-201ENST00000373006 GRM7Q14831 915 aa12.92□□□□□ -0.34
USP49-201ENST00000373006 SF3A2Q15428 464 aaKnown RBP12.92□□□□□ -0.34
USP49-201ENST00000373006 ZNF791Q3KP31 576 aaPredicted RBP12.92□□□□□ -0.34
USP49-201ENST00000373006 C3orf38Q5JPI3 329 aa12.92□□□□□ -0.34
USP49-201ENST00000373006 Q6ZNB5 142 aa12.92□□□□□ -0.34
USP49-201ENST00000373006 TTC9Q92623 222 aa12.92□□□□□ -0.34
USP49-201ENST00000373006 UCN3Q969E3 161 aa12.92□□□□□ -0.34
USP49-201ENST00000373006 EXOSC8Q96B26 276 aaKnown RBP12.92□□□□□ -0.34
USP49-201ENST00000373006 ART5Q96L15 291 aa12.92□□□□□ -0.34
USP49-201ENST00000373006 KCNJ15Q99712 375 aa12.92□□□□□ -0.34
USP49-201ENST00000373006 TREX2Q9BQ50 279 aaPredicted RBP12.92□□□□□ -0.34
USP49-201ENST00000373006 PAK6Q9NQU5 681 aaPredicted RBP12.92□□□□□ -0.34
USP49-201ENST00000373006 MGAT4AQ9UM21 535 aa12.92□□□□□ -0.34
USP49-201ENST00000373006 PRR23AA6NEV1 266 aa12.92□□□□□ -0.34
USP49-201ENST00000373006 HRO43593 1189 aa12.92□□□□□ -0.34
USP49-201ENST00000373006 SRPRAP08240 638 aaKnown RBP12.92□□□□□ -0.34
USP49-201ENST00000373006 ACP2P11117 423 aa12.92□□□□□ -0.34
USP49-201ENST00000373006 HIST2H2AA3Q6FI13 130 aa12.92□□□□□ -0.34
USP49-201ENST00000373006 CHMP1BQ7LBR1 199 aa12.92□□□□□ -0.34
USP49-201ENST00000373006 KIF18BQ86Y91 864 aa12.92□□□□□ -0.34
USP49-201ENST00000373006 CFAP206Q8IYR0 622 aa12.92□□□□□ -0.34
USP49-201ENST00000373006 HYLS1Q96M11 299 aa12.92□□□□□ -0.34
USP49-201ENST00000373006 VN1R3Q9BXE9 311 aa12.92□□□□□ -0.34
USP49-201ENST00000373006 STARD7Q9NQZ5 370 aa12.92□□□□□ -0.34
USP49-201ENST00000373006 EXTL2Q9UBQ6 330 aa12.92□□□□□ -0.34
USP49-201ENST00000373006 IL20RAQ9UHF4 553 aa12.92□□□□□ -0.34
USP49-201ENST00000373006 LZTS3O60299 673 aaPredicted RBP12.91□□□□□ -0.34
USP49-201ENST00000373006 TRIM3O75382 744 aaPredicted RBP12.91□□□□□ -0.34
USP49-201ENST00000373006 B3GALNT1O75752 331 aa12.91□□□□□ -0.34
USP49-201ENST00000373006 SYPP08247 313 aa12.91□□□□□ -0.34
USP49-201ENST00000373006 SLC6A11P48066 632 aa12.91□□□□□ -0.34
USP49-201ENST00000373006 COL9A2Q14055 689 aaPredicted RBP12.91□□□□□ -0.34
USP49-201ENST00000373006 GPR176Q14439 515 aa12.91□□□□□ -0.34
USP49-201ENST00000373006 IDNKQ5T6J7 187 aa12.91□□□□□ -0.34
USP49-201ENST00000373006 ZBTB37Q5TC79 503 aa12.91□□□□□ -0.34
USP49-201ENST00000373006 KIAA1161Q6NSJ0 714 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms