RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 TCTN3Q6NUS6 607 aa23.42■■□□□ 1.34
CTSA-203ENST00000372459 ZNF773Q6PK81 442 aa23.42■■□□□ 1.34
CTSA-203ENST00000372459 OLIG3Q7RTU3 272 aa23.42■■□□□ 1.34
CTSA-203ENST00000372459 C16orf62Q7Z3J2 963 aa23.42■■□□□ 1.34
CTSA-203ENST00000372459 TSPYL5Q86VY4 417 aaPredicted RBP23.42■■□□□ 1.34
CTSA-203ENST00000372459 CLVS1Q8IUQ0 354 aaPredicted RBP23.42■■□□□ 1.34
CTSA-203ENST00000372459 OR9A4Q8NGU2 314 aa23.42■■□□□ 1.34
CTSA-203ENST00000372459 ALPK1Q96QP1 1244 aa23.42■■□□□ 1.34
CTSA-203ENST00000372459 ZNF556Q9HAH1 456 aa23.42■■□□□ 1.34
CTSA-203ENST00000372459 SLC9A8Q9Y2E8 581 aa23.42■■□□□ 1.34
CTSA-203ENST00000372459 ARRDC5A6NEK1 342 aa23.41■■□□□ 1.34
CTSA-203ENST00000372459 FFAR1O14842 300 aa23.41■■□□□ 1.34
CTSA-203ENST00000372459 CASC3O15234 703 aaKnown RBP23.41■■□□□ 1.34
CTSA-203ENST00000372459 SLITRK5O94991 958 aa23.41■■□□□ 1.34
CTSA-203ENST00000372459 EPHA4P54764 986 aa23.41■■□□□ 1.34
CTSA-203ENST00000372459 RPP38P78345 283 aaKnown RBP23.41■■□□□ 1.34
CTSA-203ENST00000372459 CDK5R2Q13319 367 aa23.41■■□□□ 1.34
CTSA-203ENST00000372459 FAM214AQ32MH5 1076 aa23.41■■□□□ 1.34
CTSA-203ENST00000372459 DEF8Q6ZN54 512 aa23.41■■□□□ 1.34
CTSA-203ENST00000372459 TGM7Q96PF1 710 aa23.41■■□□□ 1.34
CTSA-203ENST00000372459 PITX2Q99697 317 aa23.41■■□□□ 1.34
CTSA-203ENST00000372459 RLIMQ9NVW2 624 aa23.41■■□□□ 1.34
CTSA-203ENST00000372459 TLCD2A6NGC4 264 aa23.41■■□□□ 1.34
CTSA-203ENST00000372459 FAM227AF5H4B4 570 aa23.41■■□□□ 1.34
CTSA-203ENST00000372459 MLLT3P42568 568 aaPredicted RBP23.41■■□□□ 1.34
CTSA-203ENST00000372459 GABARAPL2P60520 117 aa23.41■■□□□ 1.34
CTSA-203ENST00000372459 BROXQ5VW32 411 aa23.41■■□□□ 1.34
CTSA-203ENST00000372459 NIPAL1Q6NVV3 410 aa23.41■■□□□ 1.34
CTSA-203ENST00000372459 OR9Q2Q8NGE9 314 aa23.41■■□□□ 1.34
CTSA-203ENST00000372459 OR4D11Q8NGI4 311 aa23.41■■□□□ 1.34
CTSA-203ENST00000372459 SLC35A4Q96G79 324 aa23.41■■□□□ 1.34
CTSA-203ENST00000372459 PINK1Q9BXM7 581 aa23.41■■□□□ 1.34
CTSA-203ENST00000372459 RAB33BQ9H082 229 aa23.41■■□□□ 1.34
CTSA-203ENST00000372459 SLC38A1Q9H2H9 487 aa23.41■■□□□ 1.34
CTSA-203ENST00000372459 C19orf53Q9UNZ5 99 aaPredicted RBP23.41■■□□□ 1.34
CTSA-203ENST00000372459 E9PQ18 207 aa23.4■■□□□ 1.34
CTSA-203ENST00000372459 AGXTP21549 392 aa23.4■■□□□ 1.34
CTSA-203ENST00000372459 LAIR2Q6ISS4 152 aa23.4■■□□□ 1.34
CTSA-203ENST00000372459 ZDHHC12Q96GR4 267 aa23.4■■□□□ 1.34
CTSA-203ENST00000372459 DOK1Q99704 481 aa23.4■■□□□ 1.34
CTSA-203ENST00000372459 NMNAT1Q9HAN9 279 aaPredicted RBP23.4■■□□□ 1.34
CTSA-203ENST00000372459 PLCL2Q9UPR0 1127 aa23.4■■□□□ 1.34
CTSA-203ENST00000372459 A0A087WV62 115 aa23.4■■□□□ 1.34
CTSA-203ENST00000372459 SLC1A7O00341 560 aa23.4■■□□□ 1.34
CTSA-203ENST00000372459 CHST10O43529 356 aa23.4■■□□□ 1.34
CTSA-203ENST00000372459 LGI1O95970 557 aa23.4■■□□□ 1.34
CTSA-203ENST00000372459 NT5EP21589 574 aa23.4■■□□□ 1.34
CTSA-203ENST00000372459 EPHA2P29317 976 aa23.4■■□□□ 1.34
CTSA-203ENST00000372459 GFERP55789 205 aa23.4■■□□□ 1.34
CTSA-203ENST00000372459 SMIM11AP58511 58 aa23.4■■□□□ 1.34
CTSA-203ENST00000372459 MLLT1Q03111 559 aaPredicted RBP23.4■■□□□ 1.34
CTSA-203ENST00000372459 TRMT12Q53H54 448 aaKnown RBP23.4■■□□□ 1.34
CTSA-203ENST00000372459 HEPHL1Q6MZM0 1159 aa23.4■■□□□ 1.34
CTSA-203ENST00000372459 KCTD8Q6ZWB6 473 aa23.4■■□□□ 1.34
CTSA-203ENST00000372459 RBM45Q8IUH3 476 aaKnown RBP23.4■■□□□ 1.34
CTSA-203ENST00000372459 SHISA5Q8N114 240 aa23.4■■□□□ 1.34
CTSA-203ENST00000372459 SLC16A11Q8NCK7 471 aa23.4■■□□□ 1.34
CTSA-203ENST00000372459 CNIH3Q8TBE1 160 aa23.4■■□□□ 1.34
CTSA-203ENST00000372459 ZNF566Q969W8 418 aa23.4■■□□□ 1.34
CTSA-203ENST00000372459 HRASLS5Q96KN8 279 aa23.4■■□□□ 1.34
CTSA-203ENST00000372459 DHRS1Q96LJ7 313 aa23.4■■□□□ 1.34
CTSA-203ENST00000372459 NIPSNAP1Q9BPW8 284 aa23.4■■□□□ 1.34
CTSA-203ENST00000372459 SOHLH2Q9NX45 425 aa23.4■■□□□ 1.34
CTSA-203ENST00000372459 LRIT1Q9P2V4 623 aa23.4■■□□□ 1.34
CTSA-203ENST00000372459 EPHA6Q9UF33 1036 aa23.4■■□□□ 1.34
CTSA-203ENST00000372459 ACAD8Q9UKU7 415 aa23.4■■□□□ 1.34
CTSA-203ENST00000372459 TMCC3Q9ULS5 477 aa23.4■■□□□ 1.34
CTSA-203ENST00000372459 DSPPQ9NZW4 1301 aa23.39■■□□□ 1.34
CTSA-203ENST00000372459 SEMA7AO75326 666 aa23.39■■□□□ 1.33
CTSA-203ENST00000372459 ANGPTL1O95841 491 aa23.39■■□□□ 1.33
CTSA-203ENST00000372459 ALPPP05187 535 aa23.39■■□□□ 1.33
CTSA-203ENST00000372459 IFI6P09912 130 aa23.39■■□□□ 1.33
CTSA-203ENST00000372459 CCDC159P0C7I6 412 aa23.39■■□□□ 1.33
CTSA-203ENST00000372459 DCKP27707 260 aa23.39■■□□□ 1.33
CTSA-203ENST00000372459 CHRNEQ04844 493 aa23.39■■□□□ 1.33
CTSA-203ENST00000372459 FHL5Q5TD97 284 aa23.39■■□□□ 1.33
CTSA-203ENST00000372459 WDR53Q7Z5U6 358 aaPredicted RBP23.39■■□□□ 1.33
CTSA-203ENST00000372459 LACC1Q8IV20 430 aa23.39■■□□□ 1.33
CTSA-203ENST00000372459 FAM81AQ8TBF8 368 aa23.39■■□□□ 1.33
CTSA-203ENST00000372459 SLC9A6Q92581 669 aa23.39■■□□□ 1.33
CTSA-203ENST00000372459 C12orf43Q96C57 262 aaKnown RBP23.39■■□□□ 1.33
CTSA-203ENST00000372459 CNDP2Q96KP4 475 aaKnown RBP23.39■■□□□ 1.33
CTSA-203ENST00000372459 ERVMER34-1Q9H9K5 563 aa23.39■■□□□ 1.33
CTSA-203ENST00000372459 LIN28AQ9H9Z2 209 aaKnown RBP23.39■■□□□ 1.33
CTSA-203ENST00000372459 PDE7BQ9NP56 450 aa23.39■■□□□ 1.33
CTSA-203ENST00000372459 RNF215Q9Y6U7 377 aa23.39■■□□□ 1.33
CTSA-203ENST00000372459 THADAQ6YHU6 1953 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 A0A0A6YYC8 382 aaPredicted RBP23.38■■□□□ 1.33
CTSA-203ENST00000372459 A0A1B0GVT2 93 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 I3L1I5 382 aaPredicted RBP23.38■■□□□ 1.33
CTSA-203ENST00000372459 M0R3H8 397 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 PLOD3O60568 738 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 NME6O75414 186 aaPredicted RBP23.38■■□□□ 1.33
CTSA-203ENST00000372459 H1F0P07305 194 aaKnown RBP23.38■■□□□ 1.33
CTSA-203ENST00000372459 FUT4P22083 530 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 ALDH4A1P30038 563 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 SOX18P35713 384 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 EMP3P54852 163 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 ZNF675Q8TD23 568 aa23.38■■□□□ 1.33
CTSA-203ENST00000372459 ANKRD9Q96BM1 317 aaPredicted RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms