RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 RPS19P39019 145 aaKnown RBP8.38□□□□□ -1.07
ATG4A-203ENST00000372232 SLC11A1P49279 550 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 CASP6P55212 293 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 RING1Q06587 406 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 IL10RBQ08334 325 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 SF3A2Q15428 464 aaKnown RBP8.38□□□□□ -1.07
ATG4A-203ENST00000372232 PYDC2Q56P42 97 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 ZNF789Q5FWF6 425 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 AADACL4Q5VUY2 407 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 CD276Q5ZPR3 534 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 C3P1Q6ZMU1 363 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 CUZD1Q86UP6 607 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 CIR1Q86X95 450 aaPredicted RBP8.38□□□□□ -1.07
ATG4A-203ENST00000372232 SLC22A9Q8IVM8 553 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 CD99L2Q8TCZ2 262 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 DNASE1L2Q92874 299 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 ISG20Q96AZ6 181 aaKnown RBP8.38□□□□□ -1.07
ATG4A-203ENST00000372232 MYEOVQ96EZ4 313 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 COL21A1Q96P44 957 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 ERMAPQ96PL5 475 aaPredicted RBP8.38□□□□□ -1.07
ATG4A-203ENST00000372232 PFDN5Q99471 154 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 POLR1EQ9GZS1 481 aaKnown RBP8.38□□□□□ -1.07
ATG4A-203ENST00000372232 RIBC2Q9H4K1 309 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 SLC28A3Q9HAS3 691 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 TREM2Q9NZC2 230 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 HCSTQ9UBK5 93 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 UXTQ9UBK9 157 aaPredicted RBP8.38□□□□□ -1.07
ATG4A-203ENST00000372232 ZNF222Q9UK12 451 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 NDRG2Q9UN36 371 aaKnown RBP8.38□□□□□ -1.07
ATG4A-203ENST00000372232 PLXNA3P51805 1871 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 TEX13CA0A0J9YWL9 993 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 FAM234BA2RU67 622 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 UBE2CO00762 179 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 TO15178 435 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 SLC7A4O43246 635 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 TLR5O60602 858 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 LGI1O95970 557 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 ATXN1LP0C7T5 689 aaKnown RBP8.38□□□□□ -1.07
ATG4A-203ENST00000372232 NDUFB7P17568 137 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 PFKLP17858 780 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 C4BPBP20851 252 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 PAICSP22234 425 aaKnown RBP8.38□□□□□ -1.07
ATG4A-203ENST00000372232 CALCRP30988 508 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 ACVRL1P37023 503 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 MAN2A2P49641 1150 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 NR0B1P51843 470 aaKnown RBP8.38□□□□□ -1.07
ATG4A-203ENST00000372232 YBEYP58557 167 aaPredicted RBP8.38□□□□□ -1.07
ATG4A-203ENST00000372232 MAP4K2Q12851 820 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 ILKQ13418 452 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 SIRPB2Q5JXA9 342 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 TRIQKQ629K1 86 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 KANK2Q63ZY3 851 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 NADSYN1Q6IA69 706 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 MRPL14Q6P1L8 145 aaKnown RBP8.38□□□□□ -1.07
ATG4A-203ENST00000372232 ZNF367Q7RTV3 350 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 CYP4Z1Q86W10 505 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 NANOGP1Q8N7R0 232 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 WDSUB1Q8N9V3 476 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 PHOSPHO1Q8TCT1 267 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 ADAMTS14Q8WXS8 1223 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 NARS2Q96I59 477 aaKnown RBP8.38□□□□□ -1.07
ATG4A-203ENST00000372232 C3orf30Q96M34 536 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 SFXN2Q96NB2 322 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 PITX2Q99697 317 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 CCM2Q9BSQ5 444 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 GP6Q9HCN6 339 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 ABCB9Q9NP78 766 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 SDR39U1Q9NRG7 319 aaPredicted RBP8.38□□□□□ -1.07
ATG4A-203ENST00000372232 SEC14L3Q9UDX4 400 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 GPR160Q9UJ42 338 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 ING1Q9UK53 422 aaPredicted RBP8.38□□□□□ -1.07
ATG4A-203ENST00000372232 POMT2Q9UKY4 750 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 STUB1Q9UNE7 303 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 GPR52Q9Y2T5 361 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 MYO16Q9Y6X6 1858 aa8.38□□□□□ -1.07
ATG4A-203ENST00000372232 PRAMEF33A0A0G2JMD5 474 aa8.37□□□□□ -1.07
ATG4A-203ENST00000372232 C9orf170A2RU37 121 aa8.37□□□□□ -1.07
ATG4A-203ENST00000372232 A6NCN8 305 aa8.37□□□□□ -1.07
ATG4A-203ENST00000372232 ASPDHA6ND91 283 aa8.37□□□□□ -1.07
ATG4A-203ENST00000372232 D6RAR5 112 aa8.37□□□□□ -1.07
ATG4A-203ENST00000372232 E9PQ18 207 aa8.37□□□□□ -1.07
ATG4A-203ENST00000372232 PRAMEF10O60809 474 aa8.37□□□□□ -1.07
ATG4A-203ENST00000372232 PRAMEF11O60813 436 aa8.37□□□□□ -1.07
ATG4A-203ENST00000372232 ULK1O75385 1050 aa8.37□□□□□ -1.07
ATG4A-203ENST00000372232 EEDO75530 441 aaKnown RBP8.37□□□□□ -1.07
ATG4A-203ENST00000372232 CYP17A1P05093 508 aa8.37□□□□□ -1.07
ATG4A-203ENST00000372232 RB1P06400 928 aa8.37□□□□□ -1.07
ATG4A-203ENST00000372232 PVALBP20472 110 aaPredicted RBP8.37□□□□□ -1.07
ATG4A-203ENST00000372232 DNASE1P24855 282 aa8.37□□□□□ -1.07
ATG4A-203ENST00000372232 CD96P40200 585 aa8.37□□□□□ -1.07
ATG4A-203ENST00000372232 PBX3P40426 434 aa8.37□□□□□ -1.07
ATG4A-203ENST00000372232 XKP51811 444 aa8.37□□□□□ -1.07
ATG4A-203ENST00000372232 SMSP52788 366 aa8.37□□□□□ -1.07
ATG4A-203ENST00000372232 TSPAN5P62079 268 aa8.37□□□□□ -1.07
ATG4A-203ENST00000372232 CRYZQ08257 329 aaKnown RBP8.37□□□□□ -1.07
ATG4A-203ENST00000372232 CSHL1Q14406 222 aa8.37□□□□□ -1.07
ATG4A-203ENST00000372232 OPCMLQ14982 345 aa8.37□□□□□ -1.07
ATG4A-203ENST00000372232 TAF1AQ15573 450 aaPredicted RBP8.37□□□□□ -1.07
ATG4A-203ENST00000372232 SLC14A2Q15849 920 aa8.37□□□□□ -1.07
ATG4A-203ENST00000372232 SNAPC1Q16533 368 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms