RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 ZNF681Q96N22 645 aa27.21■■□□□ 1.95
SSBP3-204ENST00000371320 FCRL4Q96PJ5 515 aa27.21■■□□□ 1.95
SSBP3-204ENST00000371320 CTPS2Q9NRF8 586 aa27.21■■□□□ 1.95
SSBP3-204ENST00000371320 TVP23BQ9NYZ1 205 aa27.21■■□□□ 1.95
SSBP3-204ENST00000371320 CCDC59Q9P031 241 aaKnown RBP27.21■■□□□ 1.95
SSBP3-204ENST00000371320 CCRL2O00421 344 aa27.21■■□□□ 1.95
SSBP3-204ENST00000371320 HOXC4P09017 264 aaPredicted RBP27.21■■□□□ 1.95
SSBP3-204ENST00000371320 CSTF2P33240 577 aaKnown RBP eCLIP27.21■■□□□ 1.95
SSBP3-204ENST00000371320 MAN2A2P49641 1150 aa27.21■■□□□ 1.95
SSBP3-204ENST00000371320 RPS15AP62244 130 aaKnown RBP27.21■■□□□ 1.95
SSBP3-204ENST00000371320 TIMM50Q3ZCQ8 353 aa27.21■■□□□ 1.95
SSBP3-204ENST00000371320 IQCF1Q8N6M8 205 aa27.21■■□□□ 1.95
SSBP3-204ENST00000371320 SIPA1Q96FS4 1042 aa27.21■■□□□ 1.95
SSBP3-204ENST00000371320 TMEM80Q96HE8 168 aa27.21■■□□□ 1.95
SSBP3-204ENST00000371320 CA5BQ9Y2D0 317 aa27.21■■□□□ 1.95
SSBP3-204ENST00000371320 SNRNP200O75643 2136 aaKnown RBP27.2■■□□□ 1.95
SSBP3-204ENST00000371320 CDH3P22223 829 aa27.2■■□□□ 1.95
SSBP3-204ENST00000371320 RGS1Q08116 209 aa27.2■■□□□ 1.95
SSBP3-204ENST00000371320 CEBPEQ15744 281 aa27.2■■□□□ 1.95
SSBP3-204ENST00000371320 C19orf48Q6RUI8 117 aa27.2■■□□□ 1.95
SSBP3-204ENST00000371320 VN1R4Q7Z5H5 301 aa27.2■■□□□ 1.95
SSBP3-204ENST00000371320 MINDY2Q8NBR6 621 aa27.2■■□□□ 1.95
SSBP3-204ENST00000371320 MORN4Q8NDC4 146 aa27.2■■□□□ 1.95
SSBP3-204ENST00000371320 ASB12Q8WXK4 309 aa27.2■■□□□ 1.95
SSBP3-204ENST00000371320 GAL3ST3Q96A11 431 aa27.2■■□□□ 1.95
SSBP3-204ENST00000371320 MRPL38Q96DV4 380 aaKnown RBP27.2■■□□□ 1.95
SSBP3-204ENST00000371320 SRMSQ9H3Y6 488 aa27.2■■□□□ 1.95
SSBP3-204ENST00000371320 ANKRA2Q9H9E1 313 aa27.2■■□□□ 1.95
SSBP3-204ENST00000371320 ZNF624Q9P2J8 865 aaPredicted RBP27.2■■□□□ 1.95
SSBP3-204ENST00000371320 KLF15Q9UIH9 416 aa27.2■■□□□ 1.95
SSBP3-204ENST00000371320 NCKAP1Q9Y2A7 1128 aa27.2■■□□□ 1.95
SSBP3-204ENST00000371320 NR2F6P10588 404 aa27.2■■□□□ 1.94
SSBP3-204ENST00000371320 NCF4Q15080 339 aa27.2■■□□□ 1.94
SSBP3-204ENST00000371320 ZNF311Q5JNZ3 666 aa27.2■■□□□ 1.94
SSBP3-204ENST00000371320 MFSD4BQ5TF39 518 aa27.2■■□□□ 1.94
SSBP3-204ENST00000371320 CDADC1Q9BWV3 514 aa27.2■■□□□ 1.94
SSBP3-204ENST00000371320 NXF2Q9GZY0 626 aaKnown RBP27.2■■□□□ 1.94
SSBP3-204ENST00000371320 SCML1Q9UN30 329 aa27.2■■□□□ 1.94
SSBP3-204ENST00000371320 UNC80Q8N2C7 3258 aa27.19■■□□□ 1.94
SSBP3-204ENST00000371320 TRBV23OR9-2A0A075B6M9 112 aa27.19■■□□□ 1.94
SSBP3-204ENST00000371320 H0Y8X5 98 aa27.19■■□□□ 1.94
SSBP3-204ENST00000371320 ARHGAP33O14559 1287 aa27.19■■□□□ 1.94
SSBP3-204ENST00000371320 EGFP01133 1207 aa27.19■■□□□ 1.94
SSBP3-204ENST00000371320 ZNF888P0CJ79 500 aaPredicted RBP27.19■■□□□ 1.94
SSBP3-204ENST00000371320 CD40LGP29965 261 aa27.19■■□□□ 1.94
SSBP3-204ENST00000371320 RHAGQ02094 409 aa27.19■■□□□ 1.94
SSBP3-204ENST00000371320 ZNF91Q05481 1191 aa27.19■■□□□ 1.94
SSBP3-204ENST00000371320 NFATC4Q14934 902 aa27.19■■□□□ 1.94
SSBP3-204ENST00000371320 OCLNQ16625 522 aa27.19■■□□□ 1.94
SSBP3-204ENST00000371320 C1orf94Q6P1W5 598 aa27.19■■□□□ 1.94
SSBP3-204ENST00000371320 ASPGQ86U10 573 aa27.19■■□□□ 1.94
SSBP3-204ENST00000371320 ATCAYQ86WG3 371 aa27.19■■□□□ 1.94
SSBP3-204ENST00000371320 SLC34A3Q8N130 599 aa27.19■■□□□ 1.94
SSBP3-204ENST00000371320 KAT2AQ92830 837 aa27.19■■□□□ 1.94
SSBP3-204ENST00000371320 TSSK6Q9BXA6 273 aa27.19■■□□□ 1.94
SSBP3-204ENST00000371320 SLC13A4Q9UKG4 626 aa27.19■■□□□ 1.94
SSBP3-204ENST00000371320 BOLA2-SMG1P6H3BVE0 249 aa27.18■■□□□ 1.94
SSBP3-204ENST00000371320 ALPPP05187 535 aa27.18■■□□□ 1.94
SSBP3-204ENST00000371320 LSM11P83369 360 aaKnown RBP eCLIP27.18■■□□□ 1.94
SSBP3-204ENST00000371320 CHRNEQ04844 493 aa27.18■■□□□ 1.94
SSBP3-204ENST00000371320 BCDIN3DQ7Z5W3 292 aaKnown RBP27.18■■□□□ 1.94
SSBP3-204ENST00000371320 TSACCQ96A04 125 aaPredicted RBP27.18■■□□□ 1.94
SSBP3-204ENST00000371320 SLC38A1Q9H2H9 487 aa27.18■■□□□ 1.94
SSBP3-204ENST00000371320 LIPT1Q9Y234 373 aa27.18■■□□□ 1.94
SSBP3-204ENST00000371320 AGAP5A6NIR3 686 aa27.18■■□□□ 1.94
SSBP3-204ENST00000371320 ASNA1O43681 348 aa27.18■■□□□ 1.94
SSBP3-204ENST00000371320 TLX2O43763 284 aaPredicted RBP27.18■■□□□ 1.94
SSBP3-204ENST00000371320 CKMT1AP12532 417 aa27.18■■□□□ 1.94
SSBP3-204ENST00000371320 RELAQ04206 551 aa27.18■■□□□ 1.94
SSBP3-204ENST00000371320 DOC2BQ14184 412 aa27.18■■□□□ 1.94
SSBP3-204ENST00000371320 GINS1Q14691 196 aa27.18■■□□□ 1.94
SSBP3-204ENST00000371320 LTB4RQ15722 352 aa27.18■■□□□ 1.94
SSBP3-204ENST00000371320 ATAD3BQ5T9A4 648 aa27.18■■□□□ 1.94
SSBP3-204ENST00000371320 DGLUCYQ7Z3D6 616 aa27.18■■□□□ 1.94
SSBP3-204ENST00000371320 CLIP4Q8N3C7 705 aa27.18■■□□□ 1.94
SSBP3-204ENST00000371320 CCL4L1Q8NHW4 92 aa27.18■■□□□ 1.94
SSBP3-204ENST00000371320 SLC22A18Q96BI1 424 aa27.18■■□□□ 1.94
SSBP3-204ENST00000371320 WDR92Q96MX6 357 aa27.18■■□□□ 1.94
SSBP3-204ENST00000371320 OPALINQ96PE5 141 aa27.18■■□□□ 1.94
SSBP3-204ENST00000371320 TRNT1Q96Q11 434 aaKnown RBP27.18■■□□□ 1.94
SSBP3-204ENST00000371320 GPA33Q99795 319 aa27.18■■□□□ 1.94
SSBP3-204ENST00000371320 POLDIP3Q9BY77 421 aaKnown RBP27.18■■□□□ 1.94
SSBP3-204ENST00000371320 CALML5Q9NZT1 146 aa27.18■■□□□ 1.94
SSBP3-204ENST00000371320 CLEC2DQ9UHP7 191 aa27.18■■□□□ 1.94
SSBP3-204ENST00000371320 MDC1Q14676 2089 aaKnown RBP27.17■■□□□ 1.94
SSBP3-204ENST00000371320 TAF4O00268 1085 aa27.17■■□□□ 1.94
SSBP3-204ENST00000371320 SYT5O00445 386 aa27.17■■□□□ 1.94
SSBP3-204ENST00000371320 ACTR1BP42025 376 aa27.17■■□□□ 1.94
SSBP3-204ENST00000371320 GIPRP48546 466 aa27.17■■□□□ 1.94
SSBP3-204ENST00000371320 PCYT1AP49585 367 aa27.17■■□□□ 1.94
SSBP3-204ENST00000371320 TAS2R41P59536 307 aa27.17■■□□□ 1.94
SSBP3-204ENST00000371320 ACTR1AP61163 376 aa27.17■■□□□ 1.94
SSBP3-204ENST00000371320 SSX1Q16384 188 aa27.17■■□□□ 1.94
SSBP3-204ENST00000371320 TUBA3EQ6PEY2 450 aa27.17■■□□□ 1.94
SSBP3-204ENST00000371320 C16orf62Q7Z3J2 963 aa27.17■■□□□ 1.94
SSBP3-204ENST00000371320 SLC6A18Q96N87 628 aa27.17■■□□□ 1.94
SSBP3-204ENST00000371320 TAPBPLQ9BX59 468 aa27.17■■□□□ 1.94
SSBP3-204ENST00000371320 NARSO43776 548 aaKnown RBP27.17■■□□□ 1.94
SSBP3-204ENST00000371320 PRKYO43930 277 aa27.17■■□□□ 1.94
SSBP3-204ENST00000371320 KIAA0513O60268 411 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms