RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 CPTPQ5TA50 214 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 KLHL35Q6PF15 583 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 SPESP1Q6UW49 350 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 RNF44Q7L0R7 432 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 PAQR7Q86WK9 346 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 TICAM1Q8IUC6 712 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 NATD1Q8N6N6 113 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 TNIP2Q8NFZ5 429 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 OR7A2PQ8NGA2 310 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 FLVCR1-AS1Q8TAF5 88 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 C16orf78Q8WTQ4 265 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 PATE1Q8WXA2 126 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 GFM2Q969S9 779 aaKnown RBP8.24□□□□□ -1.09
TPM3-213ENST00000368545 ZUFSPQ96AP4 578 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 COQ8BQ96D53 544 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 GBP5Q96PP8 586 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 KCTD14Q9BQ13 255 aaPredicted RBP8.24□□□□□ -1.09
TPM3-213ENST00000368545 DUSP26Q9BV47 211 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 ADNPQ9H2P0 1102 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 REEP4Q9H6H4 257 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 S100A14Q9HCY8 104 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 VAPAQ9P0L0 249 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 BTNL2Q9UIR0 455 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 TRBV5-3A0A0A0MS03 114 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 A0A0J9YY10 115 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 LILRA5A6NI73 299 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 LMO7DNF2Z398 122 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 RNASET2O00584 256 aaKnown RBP8.24□□□□□ -1.09
TPM3-213ENST00000368545 LCMT2O60294 686 aaKnown RBP8.24□□□□□ -1.09
TPM3-213ENST00000368545 ANP32DO95626 131 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 TBX6O95947 436 aaPredicted RBP8.24□□□□□ -1.09
TPM3-213ENST00000368545 POLR2CP19387 275 aaPredicted RBP8.24□□□□□ -1.09
TPM3-213ENST00000368545 BSGP35613 385 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 MAPK12P53778 367 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 NR1H2P55055 460 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 PER3P56645 1201 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 TAS2R50P59544 299 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 STXBP1P61764 594 aaKnown RBP8.24□□□□□ -1.09
TPM3-213ENST00000368545 MS4A2Q01362 244 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 CHRNEQ04844 493 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 LIPEQ05469 1076 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 SLC34A1Q06495 639 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 TGM3Q08188 693 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 HEPACAMQ14CZ8 416 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 ZIC1Q15915 447 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 ADPRMQ3LIE5 342 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 RABL3Q5HYI8 236 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 ZNF787Q6DD87 383 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 OR4F3Q6IEY1 312 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 FAM71E1Q6IPT2 247 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 DHFR2Q86XF0 187 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 PQLC1Q8N2U9 271 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 ZNF548Q8NEK5 533 aaPredicted RBP8.24□□□□□ -1.09
TPM3-213ENST00000368545 OR10G6Q8NH81 332 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 WDR48Q8TAF3 677 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 LMX1AQ8TE12 382 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 SNX33Q8WV41 574 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 KCNE4Q8WWG9 221 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 ZNF764Q96H86 408 aaPredicted RBP8.24□□□□□ -1.09
TPM3-213ENST00000368545 RSRC1Q96IZ7 334 aaKnown RBP8.24□□□□□ -1.09
TPM3-213ENST00000368545 CCDC115Q96NT0 180 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 KCNC2Q96PR1 638 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 F2RL3Q96RI0 385 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 CHCHD6Q9BRQ6 235 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 ZNF717Q9BY31 904 aaPredicted RBP8.24□□□□□ -1.09
TPM3-213ENST00000368545 PAIP1Q9H074 479 aaKnown RBP8.24□□□□□ -1.09
TPM3-213ENST00000368545 DDX31Q9H8H2 851 aaKnown RBP8.24□□□□□ -1.09
TPM3-213ENST00000368545 ERVMER34-1Q9H9K5 563 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 ACTR3BQ9P1U1 418 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 KIF17Q9P2E2 1029 aa8.24□□□□□ -1.09
TPM3-213ENST00000368545 NKX1-2Q9UD57 310 aaPredicted RBP8.24□□□□□ -1.09
TPM3-213ENST00000368545 PRSS51A0A1B0GVH4 220 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 LRIT2A6NDA9 550 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 OR5K3A6NET4 321 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 CLCA1A8K7I4 914 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 GABRR3A8MPY1 467 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 K7ENP7 123 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 TBX19O60806 448 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 SERPIND1P05546 499 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 C8BP07358 591 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 FURINP09958 794 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 HOXB9P17482 250 aaPredicted RBP8.23□□□□□ -1.09
TPM3-213ENST00000368545 SSR2P43308 183 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 CSNK1EP49674 416 aaKnown RBP8.23□□□□□ -1.09
TPM3-213ENST00000368545 GSK3BP49841 420 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 CD83Q01151 205 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 KLC1Q07866 573 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 RGS1Q08116 209 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 RUNDC3AQ59EK9 446 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.23□□□□□ -1.09
TPM3-213ENST00000368545 IRAK1BP1Q5VVH5 260 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 OR4C11Q6IEV9 310 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 LCN8Q6JVE9 175 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 ARMC6Q6NXE6 501 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 TRIM40Q6P9F5 258 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 BORAQ6PGQ7 559 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 INO80CQ6PI98 192 aaPredicted RBP8.23□□□□□ -1.09
TPM3-213ENST00000368545 PLD3Q8IV08 490 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 OR2L5Q8NG80 312 aa8.23□□□□□ -1.09
TPM3-213ENST00000368545 PPCDCQ96CD2 204 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms