RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 CHRNEQ04844 493 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 SFSWAPQ12872 951 aaKnown RBP17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 USP30Q70CQ3 517 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 SPATC1Q76KD6 591 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 GDPD3Q7L5L3 318 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 VRK2Q86Y07 508 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 OR9A2Q8NGT5 310 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 HERVK_113Q902F9 699 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 ZNF764Q96H86 408 aaPredicted RBP17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 KXD1Q9BQD3 176 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 FBXL12Q9NXK8 326 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 TRBV23OR9-2A0A075B6M9 112 aa17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 MYL12BO14950 172 aa17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 SNPHO15079 494 aa17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 PEBP1P30086 187 aaKnown RBP17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 ETV5P41161 510 aa17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 MAN2A2P49641 1150 aa17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 ETV1P50549 477 aa17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 SELENBP1Q13228 472 aa17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 KIAA1211LQ6NV74 962 aa17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 CCDC190Q86UF4 302 aa17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 TTLQ8NG68 377 aa17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 OR52I1Q8NGK6 324 aa17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 BBS10Q8TAM1 723 aa17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 SDHCQ99643 169 aaPredicted RBP17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 MKRN2Q9H000 416 aaKnown RBP17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 C6orf106Q9H6K1 298 aaPredicted RBP17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 APOBEC3BQ9UH17 382 aaKnown RBP17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 ENTPD4Q9Y227 616 aa17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 A0A087WUU8 490 aa17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 ISM1B1AKI9 464 aa17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 SNRPNP63162 240 aaKnown RBP17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 DMPKQ09013 629 aa17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 LTB4RQ15722 352 aa17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 CLEC12AQ5QGZ9 265 aa17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 KIF18BQ86Y91 864 aa17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 OR4E2Q8NGC2 313 aa17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 PHOSPHO2Q8TCD6 241 aa17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 SPATA5L1Q9BVQ7 753 aa17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 CNIH4Q9P003 139 aa17.02■□□□□ 0.32
UBQLN4-201ENST00000368309 CPSF4LA6NMK7 179 aaKnown RBP17.02■□□□□ 0.31
UBQLN4-201ENST00000368309 SLITRK5O94991 958 aa17.02■□□□□ 0.31
UBQLN4-201ENST00000368309 PTNP21246 168 aa17.02■□□□□ 0.31
UBQLN4-201ENST00000368309 OCLNQ16625 522 aa17.02■□□□□ 0.31
UBQLN4-201ENST00000368309 ZNF311Q5JNZ3 666 aa17.02■□□□□ 0.31
UBQLN4-201ENST00000368309 CCBE1Q6UXH8 406 aaPredicted RBP17.02■□□□□ 0.31
UBQLN4-201ENST00000368309 YAF2Q8IY57 180 aa17.02■□□□□ 0.31
UBQLN4-201ENST00000368309 KCT2Q8NC54 265 aa17.02■□□□□ 0.31
UBQLN4-201ENST00000368309 ZNF582Q96NG8 517 aaPredicted RBP17.02■□□□□ 0.31
UBQLN4-201ENST00000368309 SLC30A2Q9BRI3 323 aa17.02■□□□□ 0.31
UBQLN4-201ENST00000368309 BCL2L10Q9HD36 194 aa17.02■□□□□ 0.31
UBQLN4-201ENST00000368309 MKLN1Q9UL63 735 aa17.02■□□□□ 0.31
UBQLN4-201ENST00000368309 NUP210Q8TEM1 1887 aaPredicted RBP17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 TMEM221A6NGB7 291 aa17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 PLD2O14939 933 aa17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 C5AR1P21730 350 aa17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 TAS2R41P59536 307 aa17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 COX10Q12887 443 aa17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 ATAT1Q5SQI0 421 aa17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 C1orf94Q6P1W5 598 aa17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 SHFQ7M4L6 423 aa17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 PRICKLE2Q7Z3G6 844 aa17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 PHC2Q8IXK0 858 aa17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 OR8H2Q8N162 312 aa17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 FAM26EQ8N5C1 309 aa17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 PROKR2Q8NFJ6 384 aa17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 OR2L5Q8NG80 312 aa17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 SLC9A6Q92581 669 aa17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 COL26A1Q96A83 441 aa17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 PRRC1Q96M27 445 aa17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 POLDIP3Q9BY77 421 aaKnown RBP17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 SLC17A9Q9BYT1 436 aa17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 NTNG1Q9Y2I2 539 aa17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 A8MU76 341 aa17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 ASGR2P07307 311 aa17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 CSNK2A2P19784 350 aaPredicted RBP17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 BTN3A2P78410 334 aa17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 RPE65Q16518 533 aa17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 OR2G6Q5TZ20 316 aa17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 MRM1Q6IN84 353 aaKnown RBP17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 OR7D2Q96RA2 312 aa17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 ZSCAN32Q9NX65 697 aa17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 KLHL3Q9UH77 587 aa17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 KIF26AQ9ULI4 1882 aaPredicted RBP17.01■□□□□ 0.31
UBQLN4-201ENST00000368309 SMIM30A4D0T7 59 aa17■□□□□ 0.31
UBQLN4-201ENST00000368309 POU2F2P09086 479 aa17■□□□□ 0.31
UBQLN4-201ENST00000368309 AVPR1BP47901 424 aa17■□□□□ 0.31
UBQLN4-201ENST00000368309 BHLHB9Q6PI77 547 aa17■□□□□ 0.31
UBQLN4-201ENST00000368309 NUP43Q8NFH3 380 aa17■□□□□ 0.31
UBQLN4-201ENST00000368309 GPR151Q8TDV0 419 aa17■□□□□ 0.31
UBQLN4-201ENST00000368309 RPP25Q9BUL9 199 aaKnown RBP17■□□□□ 0.31
UBQLN4-201ENST00000368309 GDE1Q9NZC3 331 aa17■□□□□ 0.31
UBQLN4-201ENST00000368309 CES1P1Q9UKY3 287 aa17■□□□□ 0.31
UBQLN4-201ENST00000368309 YARS2Q9Y2Z4 477 aaKnown RBP17■□□□□ 0.31
UBQLN4-201ENST00000368309 PRICKLE3O43900 615 aaPredicted RBP17■□□□□ 0.31
UBQLN4-201ENST00000368309 FCMRO60667 390 aa17■□□□□ 0.31
UBQLN4-201ENST00000368309 FHP07954 510 aa17■□□□□ 0.31
UBQLN4-201ENST00000368309 C1DQ13901 141 aaKnown RBP17■□□□□ 0.31
UBQLN4-201ENST00000368309 ZMAT1Q5H9K5 638 aa17■□□□□ 0.31
UBQLN4-201ENST00000368309 SLC48A1Q6P1K1 146 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms