RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 SLC7A7Q9UM01 511 aa12.25□□□□□ -0.45
PTPRK-207ENST00000368226 TRBV2A0A0J9YWF9 115 aa12.25□□□□□ -0.45
PTPRK-207ENST00000368226 APBB3O95704 486 aa12.25□□□□□ -0.45
PTPRK-207ENST00000368226 EEF1A2Q05639 463 aaKnown RBP12.25□□□□□ -0.45
PTPRK-207ENST00000368226 SQSTM1Q13501 440 aa12.25□□□□□ -0.45
PTPRK-207ENST00000368226 HNRNPA1L2Q32P51 320 aaKnown RBP12.25□□□□□ -0.45
PTPRK-207ENST00000368226 PYHIN1Q6K0P9 492 aa12.25□□□□□ -0.45
PTPRK-207ENST00000368226 LAS2Q8IYD9 372 aa12.25□□□□□ -0.45
PTPRK-207ENST00000368226 DPH1Q9BZG8 443 aa12.25□□□□□ -0.45
PTPRK-207ENST00000368226 CNIH4Q9P003 139 aa12.25□□□□□ -0.45
PTPRK-207ENST00000368226 WASF3Q9UPY6 502 aa12.25□□□□□ -0.45
PTPRK-207ENST00000368226 CDH10Q9Y6N8 788 aa12.25□□□□□ -0.45
PTPRK-207ENST00000368226 NUMBLQ9Y6R0 609 aa12.25□□□□□ -0.45
PTPRK-207ENST00000368226 EEF1E1O43324 174 aaKnown RBP12.25□□□□□ -0.45
PTPRK-207ENST00000368226 HLA-FP30511 346 aa12.25□□□□□ -0.45
PTPRK-207ENST00000368226 MECP2P51608 486 aaKnown RBP12.25□□□□□ -0.45
PTPRK-207ENST00000368226 DENND6BQ8NEG7 585 aa12.25□□□□□ -0.45
PTPRK-207ENST00000368226 ASB12Q8WXK4 309 aa12.25□□□□□ -0.45
PTPRK-207ENST00000368226 SLC41A3Q96GZ6 507 aa12.25□□□□□ -0.45
PTPRK-207ENST00000368226 SLC30A2Q9BRI3 323 aa12.25□□□□□ -0.45
PTPRK-207ENST00000368226 GPR83Q9NYM4 423 aa12.25□□□□□ -0.45
PTPRK-207ENST00000368226 PCDH10Q9P2E7 1040 aa12.25□□□□□ -0.45
PTPRK-207ENST00000368226 NAALAD2Q9Y3Q0 740 aa12.25□□□□□ -0.45
PTPRK-207ENST00000368226 PRSS38A1L453 326 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 G3V2L1 256 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 GTF2F2P13984 249 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 ITIH1P19827 911 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 HTR1EP28566 365 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 CXCL12P48061 93 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 TAS2R43P59537 309 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 EXOSC7Q15024 291 aaKnown RBP12.24□□□□□ -0.45
PTPRK-207ENST00000368226 NR0B2Q15466 257 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 CHRFAM7AQ494W8 412 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.24□□□□□ -0.45
PTPRK-207ENST00000368226 MANEALQ5VSG8 457 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 PNCKQ6P2M8 343 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 OR9Q2Q8NGE9 314 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 OR5B2Q96R09 309 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 MAP3K3Q99759 626 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 ABCD2Q9UBJ2 740 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 LIPT1Q9Y234 373 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 PCP4L1A6NKN8 68 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 M0R129 80 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 DEFA5Q01523 94 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 MVKQ03426 396 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 KDELC1Q6UW63 502 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 ZNF517Q6ZMY9 492 aaPredicted RBP12.24□□□□□ -0.45
PTPRK-207ENST00000368226 EID2Q8N6I1 236 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 PSD4Q8NDX1 1056 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 HDHD5Q9BXW7 423 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 NUDT15Q9NV35 164 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 PDE4DIPQ5VU43 2346 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 FOLR3P41439 243 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 CRISP1P54107 249 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 LRIF1Q5T3J3 769 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 MSANTD1Q6ZTZ1 278 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 NR4A3Q92570 626 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 NAA11Q9BSU3 229 aaPredicted RBP12.24□□□□□ -0.45
PTPRK-207ENST00000368226 SLC7A11Q9UPY5 501 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 BAIAP2Q9UQB8 552 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 MYH7P12883 1935 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 DISC1C4P0D8 188 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 TSPAN4O14817 238 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 SFTPBP07988 381 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 ZNF404Q494X3 552 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 GLT8D1Q68CQ7 371 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 TANGO2Q6ICL3 276 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 RETREG1Q9H6L5 497 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 IL17CQ9P0M4 197 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 PPP6CO00743 305 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 POLR1CO15160 346 aaPredicted RBP12.24□□□□□ -0.45
PTPRK-207ENST00000368226 RASAL1O95294 804 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 ZNF35P13682 527 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 MAGEA12P43365 314 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 SLC26A5P58743 744 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 CTXN1P60606 82 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 MOGSQ13724 837 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 RBM39Q14498 530 aaKnown RBP12.24□□□□□ -0.45
PTPRK-207ENST00000368226 ABHD17BQ5VST6 288 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 KCTD18Q6PI47 426 aaPredicted RBP12.24□□□□□ -0.45
PTPRK-207ENST00000368226 SYT14Q8NB59 555 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 THAP6Q8TBB0 222 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 RBM24Q9BX46 236 aaKnown RBP12.24□□□□□ -0.45
PTPRK-207ENST00000368226 ZNF471Q9BX82 626 aaPredicted RBP12.24□□□□□ -0.45
PTPRK-207ENST00000368226 ARMC1Q9NVT9 282 aa12.24□□□□□ -0.45
PTPRK-207ENST00000368226 USP36Q9P275 1121 aaKnown RBP12.24□□□□□ -0.45
PTPRK-207ENST00000368226 SCN11AQ9UI33 1791 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 ZBTB42B2RXF5 422 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 PRAMEF2O60811 474 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 RHCEP18577 417 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 NDUFV2P19404 249 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 DPPA4Q7L190 304 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 TRMT10AQ8TBZ6 339 aaKnown RBP12.23□□□□□ -0.45
PTPRK-207ENST00000368226 DDIT4LQ96D03 193 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 SERINC2Q96SA4 455 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 CDCA3Q99618 268 aaPredicted RBP12.23□□□□□ -0.45
PTPRK-207ENST00000368226 ACTRT3Q9BYD9 372 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 GDE1Q9NZC3 331 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 ERVK-19Q9WJR5 959 aa12.23□□□□□ -0.45
PTPRK-207ENST00000368226 CNOT4O95628 575 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms